Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_12500 and AO356_12505 are separated by 34 nucleotidesAO356_12505 and AO356_12510 are separated by 363 nucleotidesAO356_12510 and AO356_12515 are separated by 95 nucleotidesAO356_12515 and AO356_12520 are separated by 82 nucleotides AO356_12500: AO356_12500 - ribonuclease PH, at 2,853,219 to 2,853,941 _12500 AO356_12505: AO356_12505 - orotate phosphoribosyltransferase, at 2,853,976 to 2,854,344 _12505 AO356_12510: AO356_12510 - sodium:glutamate symporter, at 2,854,708 to 2,855,916 _12510 AO356_12515: AO356_12515 - exodeoxyribonuclease III, at 2,856,012 to 2,856,791 _12515 AO356_12520: AO356_12520 - orotate phosphoribosyltransferase, at 2,856,874 to 2,857,518 _12520
Group Condition AO356_12500 AO356_12505 AO356_12510 AO356_12515 AO356_12520
survival 4C survival; 192 hrs -1.7 +0.0 -0.3 -3.0 -4.4
carbon source D-Glucosamine Hydrochloride (C) +0.8 -0.0 +0.0 -3.4 -4.5
stress Sisomicin 0.001 mg/ml -0.1 -0.2 -0.2 -2.8 -3.6
stress Spectinomycin 0.025 mg/ml -1.2 -0.0 -0.2 -2.3 -3.1
stress methylglyoxal 0.016 vol% +0.5 -0.0 -0.3 -3.6 -3.2
survival 4C survival; 1152 hrs -0.6 +0.1 -0.2 -2.5 -3.5
pH Minimal media pH9 -1.3 -0.1 -0.2 -0.4 -4.7
motility outer cut, LB soft agar motility assay -0.4 -0.1 +0.3 -2.3 -4.2
carbon source Carbon source Sucrose 10 mM -0.7 -0.3 +0.1 -1.2 -4.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.2 +0.1 -0.0 -1.2 -5.0
carbon source L-Proline (C) -0.3 +0.1 +0.2 -1.4 -4.4
pH Minimal media pH8 -0.4 -0.2 -0.1 +1.0 -4.7
nitrogen source D-Serine (N) +1.0 +0.0 +0.3 -1.7 -3.8
nitrogen source Adenine (N) +0.9 +0.2 -0.3 +0.3 -5.1
carbon source Carbon source D-Mannitol 5 mM -1.1 +0.0 -0.1 +1.3 -4.1
nitrogen source Inosine (N) +1.8 +0.0 -0.2 -0.6 -5.0
carbon source L-Isoleucine (C) -1.9 -0.0 -0.1 +2.5 -4.3
carbon source L-Alanine (C) -0.7 -0.1 +0.2 +1.1 -4.4
nitrogen source L-Isoleucine (N) -2.5 -0.2 +0.3 +3.0 -4.3
nitrogen source L-Phenylalanine (N) -0.3 -0.2 -0.0 +1.4 -4.4
carbon source Inosine (C) +1.0 -0.0 -0.1 +1.0 -4.5
carbon source Ethanol (C) +0.4 -0.0 -0.0 +1.7 -4.4
carbon source L-Leucine (C) +0.6 -0.0 +0.1 +1.9 -4.3
carbon source D-Alanine (C) +0.5 -0.0 +0.1 +2.3 -4.4
carbon source L-Histidine (C) +0.5 -0.2 +0.0 +2.6 -4.3
carbon source D-Fructose (C) -0.1 -0.1 +0.2 +2.5 -3.5
carbon source D-Fructose (C) -0.1 +0.0 +0.1 +2.7 -3.6
carbon source L-Histidine (C) +0.4 +0.0 +0.1 +2.5 -3.5
nitrogen source L-Leucine (N) -0.3 +0.2 +0.2 +5.5 -4.4
nitrogen source L-tyrosine (N) -0.7 -0.2 +0.4 +7.8 -3.9
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