Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_12240 and AO356_12245 are separated by 158 nucleotidesAO356_12245 and AO356_12250 overlap by 8 nucleotidesAO356_12250 and AO356_12255 overlap by 37 nucleotidesAO356_12255 and AO356_12260 overlap by 4 nucleotides AO356_12240: AO356_12240 - type VI secretion protein ImpA, at 2,791,727 to 2,793,664 _12240 AO356_12245: AO356_12245 - ClpV1 family T6SS ATPase, at 2,793,823 to 2,796,501 _12245 AO356_12250: AO356_12250 - type VI secretion protein, at 2,796,494 to 2,797,546 _12250 AO356_12255: AO356_12255 - type VI secretion system protein ImpG, at 2,797,510 to 2,799,369 _12255 AO356_12260: AO356_12260 - type VI secretion system lysozyme, at 2,799,366 to 2,799,878 _12260
Group Condition AO356_12240 AO356_12245 AO356_12250 AO356_12255 AO356_12260
motility outer cut, LB soft agar motility assay -0.0 -0.3 -0.1 -0.4 N.D.
survival 4C survival; 1152 hrs -0.2 -0.3 -0.2 -0.1 N.D.
stress Choline chloride 500 mM +0.0 -0.4 -0.1 -0.1 N.D.
stress Benzalkonium Chloride 0.016 mg/ml +0.0 -0.5 -0.1 +0.0 N.D.
motility outer cut, LB soft agar motility assay +0.0 -0.3 -0.4 +0.1 N.D.
stress syringaldehyde 5 mM +0.0 -0.2 -0.2 -0.1 N.D.
nitrogen source L-Isoleucine (N) +0.1 -0.3 -0.1 -0.1 N.D.
carbon source L-Leucine (C) +0.0 -0.4 +0.0 -0.1 N.D.
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 -0.3 +0.2 -0.5 N.D.
anaerobic Nitrate reduction with yeast extract -0.2 -0.4 +0.0 +0.1 N.D.
nitrogen source L-Leucine (N) +0.0 -0.4 -0.1 +0.1 N.D.
stress Nickel (II) chloride 0.625 mM +0.1 -0.3 -0.1 -0.1 N.D.
carbon source Inosine (C) +0.0 -0.4 +0.1 -0.1 N.D.
carbon source NAG (C) +0.1 -0.4 -0.0 -0.1 N.D.
carbon source Putrescine (C) +0.1 -0.2 -0.1 +0.1 N.D.
stress Lomefloxacin 0.0005 mM +0.0 -0.2 +0.2 -0.1 N.D.
stress Tetracycline 0.0001 mg/ml +0.1 -0.2 +0.2 +0.0 N.D.
carbon source L-Isoleucine (C) +0.0 -0.2 +0.1 +0.2 N.D.
stress methylglyoxal 0.016 vol% -0.1 -0.2 +0.2 +0.2 N.D.
stress Sisomicin 0.001 mg/ml +0.2 -0.2 +0.0 +0.1 N.D.
carbon source L-Lysine (C) +0.1 +0.2 -0.3 +0.2 N.D.
motility outer cut, LB soft agar motility assay +0.3 -0.0 +0.1 -0.2 N.D.
carbon source L-Malic (C) +0.1 -0.1 +0.2 +0.1 N.D.
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.1 -0.1 +0.1 +0.4 N.D.
nitrogen source D-Serine (N) +0.3 -0.1 +0.1 +0.2 N.D.
stress Chlorite 0.04 mM +0.1 -0.0 +0.4 +0.2 N.D.
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.4 +0.0 +0.3 +0.2 N.D.
stress Paraquat dichloride 0.0625 mg/ml +0.4 +0.2 +0.2 +0.5 N.D.
stress Paraquat dichloride 0.0625 mg/ml +0.4 +0.2 +0.4 +0.2 N.D.
stress KB-half, Pseudo5 supernatant +0.1 +0.5 +0.5 +0.5 N.D.
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