Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_12230 and AO356_12235 are separated by 12 nucleotidesAO356_12235 and AO356_12240 are separated by 18 nucleotidesAO356_12240 and AO356_12245 are separated by 158 nucleotidesAO356_12245 and AO356_12250 overlap by 8 nucleotides AO356_12230: AO356_12230 - type IV secretion protein Rhs, at 2,786,822 to 2,791,261 _12230 AO356_12235: AO356_12235 - hypothetical protein, at 2,791,274 to 2,791,708 _12235 AO356_12240: AO356_12240 - type VI secretion protein ImpA, at 2,791,727 to 2,793,664 _12240 AO356_12245: AO356_12245 - ClpV1 family T6SS ATPase, at 2,793,823 to 2,796,501 _12245 AO356_12250: AO356_12250 - type VI secretion protein, at 2,796,494 to 2,797,546 _12250
Group Condition AO356_12230 AO356_12235 AO356_12240 AO356_12245 AO356_12250
motility outer cut, LB soft agar motility assay +0.0 -0.6 +0.0 -0.3 -0.4
stress Cisplatin 0.0032 mg/ml -0.0 -0.7 -0.1 -0.3 +0.0
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.0 -0.7 -0.0 -0.2 +0.0
carbon source L-Lysine (C) -0.0 -1.0 +0.1 -0.0 +0.1
resistance 20 mM putrescine +0.0 -0.9 -0.0 -0.1 +0.1
carbon source Carbon source D-Mannitol 2.5 mM +0.1 -0.4 +0.0 -0.3 -0.1
carbon source Carbon source D-Glucose 10 mM +0.0 -0.8 -0.0 +0.1 -0.1
carbon source Carbon source Sucrose 5 mM +0.0 -0.7 +0.0 +0.1 +0.1
survival 4C survival; 1152 hrs +0.0 +0.2 -0.2 -0.3 -0.2
nitrogen source D-Glucosamine Hydrochloride (N) -0.0 -0.5 +0.0 +0.2 -0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.1 -0.7 +0.2 +0.0 +0.1
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.0 -0.5 +0.1 +0.2 +0.1
anaerobic Nitrate reduction with yeast extract +0.1 +0.3 -0.2 -0.4 +0.0
carbon source NAG (C) +0.1 +0.4 +0.1 -0.4 -0.0
stress perchlorate 75 mM -0.0 +0.6 +0.0 +0.1 -0.2
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.0 -0.2 +0.4 +0.0 +0.3
stress nitrate 200 mM +0.1 +0.7 +0.1 -0.3 +0.0
stress methylglyoxal 0.016 vol% +0.0 +0.6 -0.1 -0.2 +0.2
stress Cephalothin 2 mg/ml -0.0 +0.7 -0.0 +0.0 -0.1
carbon source D-Glucose (C) +0.0 +0.6 +0.0 -0.1 +0.2
stress nitrite 10 mM +0.0 +0.6 +0.1 +0.1 -0.1
stress Chlorite 0.04 mM -0.0 +0.4 +0.1 -0.0 +0.4
nitrogen source D-Serine (N) +0.1 +0.5 +0.3 -0.1 +0.1
stress Thallium(I) acetate 0.008 mg/ml -0.0 +0.8 +0.2 +0.1 -0.1
stress Chloramphenicol 0.005 mg/ml +0.0 +0.9 -0.0 -0.0 -0.0
motility outer cut, LB soft agar motility assay +0.2 +0.7 +0.3 -0.0 +0.1
stress Paraquat dichloride 0.0625 mg/ml +0.1 +0.3 +0.4 +0.2 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.3 +1.1 +0.1 -0.1 +0.1
stress KB-half, Pseudo5 supernatant +0.2 +0.7 +0.1 +0.5 +0.5
stress Paraquat dichloride 0.0625 mg/ml +0.1 +0.8 +0.4 +0.2 +0.4
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