Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_11950 and AO356_11955 are separated by 27 nucleotidesAO356_11955 and AO356_11960 are separated by 12 nucleotidesAO356_11960 and AO356_11965 are separated by 119 nucleotidesAO356_11965 and AO356_11970 are separated by 122 nucleotides AO356_11950: AO356_11950 - NADH:ubiquinone oxidoreductase, at 2,709,427 to 2,709,780 _11950 AO356_11955: AO356_11955 - cobalamin biosynthesis protein CobW, at 2,709,808 to 2,710,773 _11955 AO356_11960: AO356_11960 - hypothetical protein, at 2,710,786 to 2,711,208 _11960 AO356_11965: AO356_11965 - pyridoxamine kinase, at 2,711,328 to 2,712,200 _11965 AO356_11970: AO356_11970 - acyl-CoA hydrolase, at 2,712,323 to 2,712,808 _11970
Group Condition AO356_11950 AO356_11955 AO356_11960 AO356_11965 AO356_11970
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.4 -0.7 -0.4 -0.3 -0.2
carbon source acetate (C) +0.0 -0.3 -0.9 +0.1 -0.1
stress KB-half, Pseudo5 supernatant -0.2 -0.3 -0.2 -0.2 -0.1
anaerobic Nitrate reduction with yeast extract +0.0 +0.3 +0.1 -0.5 -0.7
carbon source a-Ketoglutaric (C) +0.1 -0.1 -0.1 +0.0 -0.8
stress Sisomicin 0.001 mg/ml -0.2 -0.1 -0.4 -0.3 +0.1
carbon source a-Ketoglutaric (C) +0.0 -0.1 -0.1 -0.0 -0.6
carbon source D-Lactate (C) -0.1 -0.2 -0.3 -0.1 +0.1
carbon source D-Lactate (C) +0.1 -0.1 -0.4 +0.2 -0.4
carbon source acetate (C) +0.2 -0.1 -0.8 +0.3 -0.1
carbon source L-Histidine (C) +0.0 -0.2 -0.1 +0.1 -0.4
motility outer cut, LB soft agar motility assay +0.4 +0.1 -0.1 -0.4 -0.5
stress nitrate 200 mM -0.2 +0.1 -0.2 +0.1 -0.2
survival 4C survival; 1152 hrs +0.1 +0.1 +0.2 -0.5 -0.3
stress Chlorite 0.08 mM -0.0 -0.2 -0.1 -0.3 +0.2
pH Minimal media pH8 -0.1 +0.1 +0.1 -0.0 -0.4
pH Minimal media pH9 -0.1 -0.0 +0.4 -0.3 -0.2
carbon source D-Xylose (C) +0.1 +0.1 -0.1 -0.3 -0.2
stress Benzethonium chloride 0.025 mM +0.0 -0.2 +0.2 -0.3 +0.1
stress Thallium(I) acetate 0.008 mg/ml +0.3 -0.2 +0.1 -0.0 -0.2
carbon source Carbon source D-Mannitol 10 mM +0.1 +0.1 -0.2 -0.2 +0.2
stress Nickel (II) chloride 0.625 mM +0.0 -0.1 -0.4 +0.3 +0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.2 -0.0 +0.4 +0.3 -0.7
carbon source Carbon source D-Mannitol 5 mM +0.1 +0.3 -0.1 -0.1 +0.1
motility outer cut, LB soft agar motility assay -0.4 +0.5 +0.2 +0.2 -0.2
carbon source L-Malic (C) -0.0 -0.2 +0.0 +0.2 +0.4
motility outer cut, LB soft agar motility assay +0.2 -0.2 +0.0 +0.1 +0.3
carbon source Carbon source D-Glucose 10 mM +0.0 +0.1 +0.1 -0.1 +0.5
carbon source Carbon source Sucrose 10 mM +0.1 +0.2 -0.1 +0.2 +0.3
stress methylglyoxal 0.016 vol% -0.2 +0.1 +0.0 +0.3 +0.6
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