Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_11940 and AO356_11945 overlap by 1 nucleotidesAO356_11945 and AO356_11950 overlap by 4 nucleotidesAO356_11950 and AO356_11955 are separated by 27 nucleotidesAO356_11955 and AO356_11960 are separated by 12 nucleotides AO356_11940: AO356_11940 - 4-hydroxytetrahydrobiopterin dehydratase, at 2,707,572 to 2,708,780 _11940 AO356_11945: AO356_11945 - hypothetical protein, at 2,708,780 to 2,709,430 _11945 AO356_11950: AO356_11950 - NADH:ubiquinone oxidoreductase, at 2,709,427 to 2,709,780 _11950 AO356_11955: AO356_11955 - cobalamin biosynthesis protein CobW, at 2,709,808 to 2,710,773 _11955 AO356_11960: AO356_11960 - hypothetical protein, at 2,710,786 to 2,711,208 _11960
Group Condition AO356_11940 AO356_11945 AO356_11950 AO356_11955 AO356_11960
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 -0.3 -0.4 -0.7 -0.4
carbon source acetate (C) +0.0 -0.2 +0.0 -0.3 -0.9
carbon source acetate (C) -0.3 -0.2 +0.2 -0.1 -0.8
stress KB-half, Pseudo5 supernatant -0.1 -0.2 -0.2 -0.3 -0.2
stress Sisomicin 0.001 mg/ml -0.3 -0.1 -0.2 -0.1 -0.4
stress Nickel (II) chloride 0.625 mM -0.5 -0.0 +0.0 -0.1 -0.4
stress Cisplatin 0.0032 mg/ml -0.4 -0.2 -0.0 -0.2 -0.1
carbon source L-Arabinose (C) -0.3 -0.1 -0.0 -0.2 -0.2
nitrogen source Urea (N) -0.1 -0.4 -0.1 -0.1 -0.2
carbon source D-Lactate (C) -0.1 -0.1 -0.1 -0.2 -0.3
carbon source D-Ribose (C) -0.1 -0.2 +0.0 -0.1 -0.3
stress Lomefloxacin 0.0005 mM -0.5 -0.0 -0.2 +0.0 +0.0
carbon source L-Lactate (C) -0.1 -0.3 -0.0 +0.1 -0.3
carbon source D-Lactate (C) -0.1 -0.2 +0.1 -0.1 -0.4
stress sodium fluoride 6.25 mM -0.2 -0.3 +0.2 -0.0 -0.2
stress nitrate 200 mM -0.1 -0.1 -0.2 +0.1 -0.2
pH Minimal media pH8 -0.3 -0.1 -0.1 +0.1 +0.1
stress Cobalt chloride 0.08 mM -0.3 -0.2 +0.1 +0.1 -0.0
survival 4C survival; 1152 hrs -0.2 -0.3 +0.1 +0.1 +0.2
stress Benzethonium chloride 0.025 mM -0.3 +0.2 +0.0 -0.2 +0.2
pH Minimal media pH9 -0.2 -0.1 -0.1 -0.0 +0.4
carbon source L-Isoleucine (C) +0.2 +0.1 -0.2 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.1 +0.2 -0.2 +0.0
stress D-Cycloserine 0.1 mg/ml -0.3 +0.2 +0.2 +0.1 +0.1
stress Cisplatin 0.0032 mg/ml +0.3 -0.1 -0.1 -0.1 +0.2
stress Thallium(I) acetate 0.008 mg/ml +0.1 -0.1 +0.3 -0.2 +0.1
anaerobic Nitrate reduction with yeast extract -0.2 +0.2 +0.0 +0.3 +0.1
motility outer cut, LB soft agar motility assay +0.2 +0.0 -0.4 +0.5 +0.2
motility outer cut, LB soft agar motility assay +0.2 -0.0 +0.4 +0.1 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +0.2 +0.2 -0.0 +0.4
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