Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_11735 and AO356_11740 are separated by 1 nucleotidesAO356_11740 and AO356_11745 are separated by 327 nucleotidesAO356_11745 and AO356_11750 overlap by 8 nucleotidesAO356_11750 and AO356_11755 are separated by 3 nucleotides AO356_11735: AO356_11735 - XRE family transcriptional regulator, at 2,657,688 to 2,658,464 _11735 AO356_11740: AO356_11740 - glucosamine--fructose-6-phosphate aminotransferase, at 2,658,466 to 2,660,298 _11740 AO356_11745: AO356_11745 - hypothetical protein, at 2,660,626 to 2,661,084 _11745 AO356_11750: AO356_11750 - toxin HipA, at 2,661,077 to 2,662,333 _11750 AO356_11755: AO356_11755 - ADP-ribose pyrophosphatase, at 2,662,337 to 2,663,044 _11755
Group Condition AO356_11735 AO356_11740 AO356_11745 AO356_11750 AO356_11755
stress Chlorite 0.04 mM -2.7 N.D. N.D. +0.0 N.D.
anaerobic Nitrate reduction with yeast extract -1.7 N.D. N.D. +0.1 N.D.
carbon source Carnitine Hydrochloride (C) -1.3 N.D. N.D. +0.0 N.D.
stress Aluminum chloride 5 mM -1.1 N.D. N.D. -0.0 N.D.
survival 4C survival; 360 hrs -0.8 N.D. N.D. -0.3 N.D.
carbon source L-Lysine (C) -1.0 N.D. N.D. +0.1 N.D.
carbon source succinate (C) -0.8 N.D. N.D. -0.0 N.D.
motility outer cut, LB soft agar motility assay -0.6 N.D. N.D. -0.1 N.D.
carbon source Carbon source D-Mannitol 2.5 mM -0.6 N.D. N.D. -0.0 N.D.
carbon source L-Leucine (C) -0.6 N.D. N.D. -0.0 N.D.
stress nitrite 10 mM -0.7 N.D. N.D. +0.1 N.D.
stress Nalidixic 0.004 mg/ml -0.5 N.D. N.D. -0.1 N.D.
stress Paraquat dichloride 0.0625 mg/ml -0.6 N.D. N.D. -0.0 N.D.
pH Minimal media pH7 -0.6 N.D. N.D. +0.0 N.D.
nitrogen source L-Leucine (N) -0.5 N.D. N.D. -0.1 N.D.
nitrogen source D-Serine (N) -0.4 N.D. N.D. -0.1 N.D.
stress KB-half, Pseudo5 supernatant -0.7 N.D. N.D. +0.2 N.D.
carbon source Carbon source Sucrose 5 mM -0.6 N.D. N.D. +0.1 N.D.
stress perchlorate 75 mM -0.5 N.D. N.D. +0.0 N.D.
stress Vanillin 2.5 mM -0.5 N.D. N.D. +0.1 N.D.
nitrogen source L-tyrosine (N) +0.5 N.D. N.D. -0.1 N.D.
carbon source L-Glutamic (C) +0.5 N.D. N.D. -0.1 N.D.
stress Tetracycline 0.0001 mg/ml +0.5 N.D. N.D. -0.0 N.D.
stress Sisomicin 0.001 mg/ml +0.7 N.D. N.D. -0.2 N.D.
nitrogen source Thymine (N) +0.6 N.D. N.D. -0.0 N.D.
carbon source Carbon source D,L-Lactate 10 mM +0.4 N.D. N.D. +0.2 N.D.
motility outer cut, LB soft agar motility assay +0.4 N.D. N.D. +0.3 N.D.
carbon source Glycerol (C) +0.6 N.D. N.D. +0.1 N.D.
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.8 N.D. N.D. +0.1 N.D.
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.9 N.D. N.D. +0.3 N.D.
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