Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_11305 and AO356_11310 are separated by 163 nucleotidesAO356_11310 and AO356_11315 are separated by 13 nucleotidesAO356_11315 and AO356_11320 are separated by 112 nucleotidesAO356_11320 and AO356_11325 are separated by 208 nucleotides AO356_11305: AO356_11305 - quinone oxidoreductase, at 2,562,578 to 2,563,555 _11305 AO356_11310: AO356_11310 - coproporphyrinogen III oxidase, at 2,563,719 to 2,564,633 _11310 AO356_11315: AO356_11315 - shikimate dehydrogenase, at 2,564,647 to 2,565,468 _11315 AO356_11320: AO356_11320 - SulP family inorganic anion transporter, at 2,565,581 to 2,567,149 _11320 AO356_11325: AO356_11325 - glycine/betaine ABC transporter substrate-binding protein, at 2,567,358 to 2,568,278 _11325
Group Condition AO356_11305 AO356_11310 AO356_11315 AO356_11320 AO356_11325
pH Minimal media pH6 +0.0 N.D. -3.8 -0.1 -0.1
pH Minimal media pH7 -0.0 N.D. -3.7 -0.1 -0.1
temperature LB 20C +0.0 N.D. -3.7 -0.1 -0.1
pH Minimal media pH8 -0.0 N.D. -3.7 -0.1 +0.0
pH Minimal media pH7 -0.0 N.D. -3.7 -0.0 +0.1
pH Minimal media pH9 -0.0 N.D. -3.4 -0.1 +0.1
survival 4C survival; 24 hrs +0.1 N.D. -3.5 +0.0 -0.0
stress Cephalothin 2 mg/ml +0.0 N.D. -3.3 +0.0 -0.1
survival 4C survival; 192 hrs -0.1 N.D. -3.1 -0.1 -0.0
stress perchlorate 75 mM -0.0 N.D. -3.0 -0.1 -0.1
nitrogen source Thymine (N) -0.0 N.D. -3.0 -0.0 -0.2
nitrogen source nitrite (N) -0.0 N.D. -3.1 -0.1 -0.0
pH Minimal media pH8 +0.1 N.D. -3.3 +0.0 -0.0
carbon source L-Asparagine (C) -0.0 N.D. -3.1 -0.0 -0.1
nitrogen source Adenosine (N) +0.0 N.D. -3.0 -0.0 -0.2
carbon source Tween 20 (C) -0.0 N.D. -2.9 -0.1 -0.1
anaerobic Nitrate reduction with yeast extract -0.3 N.D. -2.8 -0.2 +0.2
nitrogen source Cytosine (N) -0.0 N.D. -3.0 -0.1 -0.0
carbon source L-Asparagine (C) +0.0 N.D. -3.1 -0.0 -0.0
carbon source L-Glutamine (C) +0.0 N.D. -3.0 -0.1 -0.0
nitrogen source Adenine (N) +0.0 N.D. -3.1 +0.1 -0.0
carbon source L-Arginine (C) +0.1 N.D. -3.0 -0.0 -0.1
carbon source L-Histidine (C) +0.1 N.D. -2.9 -0.1 -0.1
pH Minimal media pH6 +0.0 N.D. -3.1 +0.1 +0.0
nitrogen source Ammonium chloride (N) -0.1 N.D. -3.0 +0.1 -0.0
survival 4C survival; 360 hrs -0.0 N.D. -2.9 -0.1 +0.1
carbon source L-Aspartic Acid (C) +0.1 N.D. -3.0 +0.0 +0.0
nitrogen source Uridine (N) +0.1 N.D. -3.0 -0.0 +0.1
carbon source Uridine (C) +0.1 N.D. -3.0 -0.0 +0.1
carbon source Tween 20 (C) +0.2 N.D. -3.0 +0.0 +0.0
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