Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_10685 and AO356_10690 are separated by 168 nucleotidesAO356_10690 and AO356_10695 are separated by 292 nucleotidesAO356_10695 and AO356_10700 are separated by 144 nucleotidesAO356_10700 and AO356_10705 are separated by 296 nucleotides AO356_10685: AO356_10685 - ABC transporter permease, at 2,434,356 to 2,435,369 _10685 AO356_10690: AO356_10690 - hypothetical protein, at 2,435,538 to 2,435,720 _10690 AO356_10695: AO356_10695 - diguanylate cyclase, at 2,436,013 to 2,437,920 _10695 AO356_10700: AO356_10700 - aminotransferase, at 2,438,065 to 2,439,249 _10700 AO356_10705: AO356_10705 - diguanylate cyclase, at 2,439,546 to 2,440,535 _10705
Group Condition AO356_10685 AO356_10690 AO356_10695 AO356_10700 AO356_10705
carbon source Putrescine (C) -0.1 N.D. -0.9 -0.3 -0.0
stress Benzalkonium Chloride 0.016 mg/ml +0.2 N.D. -0.1 -1.1 -0.2
carbon source Carnitine Hydrochloride (C) -0.1 N.D. -1.1 +0.0 +0.0
carbon source Carbon source D-Mannitol 5 mM -0.1 N.D. -1.0 -0.1 +0.1
carbon source Carbon source Sucrose 2.5 mM -0.1 N.D. -1.0 +0.0 +0.0
carbon source Inosine (C) +0.0 N.D. -1.0 +0.0 -0.1
carbon source Carbon source D-Mannitol 2.5 mM +0.1 N.D. -0.9 -0.1 +0.1
carbon source Carbon source Sucrose 10 mM +0.1 N.D. -1.2 +0.2 +0.2
carbon source Carbon source D,L-Lactate 10 mM +0.1 N.D. -0.8 -0.2 +0.2
stress Spectinomycin 0.025 mg/ml +0.1 N.D. -1.1 +0.2 +0.2
nitrogen source L-tyrosine (N) +0.2 N.D. -0.9 +0.3 -0.1
nitrogen source L-Isoleucine (N) -0.1 N.D. -0.8 +0.2 +0.1
carbon source L-Arabinose (C) +0.1 N.D. -0.7 +0.3 +0.1
stress Cobalt chloride 0.08 mM -0.2 N.D. -0.4 +0.4 +0.1
nitrogen source Inosine (N) +0.2 N.D. -0.6 +0.3 +0.2
stress Nickel (II) chloride 0.625 mM +0.1 N.D. -0.6 +0.6 +0.1
stress Cholin acetate 40 mM +0.3 N.D. +1.3 -0.9 -0.2
stress Cobalt chloride 0.08 mM -0.2 N.D. -0.2 +0.7 +0.1
stress Cephalothin 2 mg/ml -0.1 N.D. +0.9 -0.2 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 N.D. +0.8 +0.2 -0.2
anaerobic Nitrate reduction with yeast extract -0.0 N.D. +1.0 -0.6 +0.3
motility outer cut, LB soft agar motility assay +0.3 N.D. -0.4 +0.8 +0.0
survival 4C survival; 1152 hrs +0.2 N.D. +0.8 -0.3 -0.0
stress 1-ethyl-3-methylimidazolium acetate 5 mM +0.1 N.D. +1.2 -0.2 -0.3
motility outer cut, LB soft agar motility assay -0.0 N.D. -0.2 +0.9 +0.1
stress Cholin acetate 20 mM +0.3 N.D. +1.3 -0.4 -0.2
stress acetate 40 mM +0.0 N.D. +1.9 -0.6 -0.2
motility outer cut, LB soft agar motility assay +0.1 N.D. -0.1 +1.2 +0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.1 N.D. +2.3 -0.4 -0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.1 N.D. +2.5 -0.3 -0.0
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