Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_10600 and AO356_10605 are separated by 10 nucleotidesAO356_10605 and AO356_10610 are separated by 32 nucleotidesAO356_10610 and AO356_10615 are separated by 356 nucleotidesAO356_10615 and AO356_10620 are separated by 252 nucleotides AO356_10600: AO356_10600 - aminobenzoate oxygenase, at 2,411,577 to 2,412,509 _10600 AO356_10605: AO356_10605 - peptide transporter, at 2,412,520 to 2,416,086 _10605 AO356_10610: AO356_10610 - polyketide cyclase, at 2,416,119 to 2,416,583 _10610 AO356_10615: AO356_10615 - chemotaxis protein, at 2,416,940 to 2,418,820 _10615 AO356_10620: AO356_10620 - RNA polymerase subunit sigma, at 2,419,073 to 2,419,573 _10620
Group Condition AO356_10600 AO356_10605 AO356_10610 AO356_10615 AO356_10620
anaerobic Nitrate reduction with yeast extract -0.3 -0.1 -1.6 -0.3 -0.3
stress Sisomicin 0.001 mg/ml -0.5 -0.0 -0.6 -0.1 -0.1
stress Chlorite 0.04 mM +0.5 -0.1 -1.2 +0.0 -0.2
carbon source D-Sorbitol (C) -0.1 -0.1 -0.5 -0.1 -0.2
carbon source D-Galactose (C) -0.0 -0.1 -0.6 -0.1 -0.2
carbon source Fumarate (C) +0.1 -0.1 -0.6 -0.0 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.5 -0.2 -0.3 -0.0 +0.3
temperature LB 30C +0.0 -0.1 -0.7 -0.1 +0.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.4 -0.1 +0.2 -0.2 -0.1
stress Nickel (II) chloride 0.625 mM +0.3 -0.1 -0.7 +0.0 -0.1
stress Thallium(I) acetate 0.008 mg/ml -0.1 -0.1 -0.6 +0.1 +0.1
stress copper (II) chloride 2.5 mM -0.5 -0.1 -0.1 +0.2 -0.1
nitrogen source Adenine (N) +0.2 +0.1 -0.6 -0.1 -0.1
carbon source Carbon source Sucrose 10 mM +0.3 -0.1 -0.5 +0.1 -0.2
carbon source Carbon source D-Mannitol 2.5 mM +0.1 +0.0 -0.7 +0.1 +0.2
carbon source L-Glutamine (C) +0.3 +0.1 -0.6 +0.1 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.1 +0.4 -0.2 -0.3
stress Doxycycline hyclate 0.0001 mg/ml +0.2 -0.1 +0.4 -0.2 -0.2
carbon source L-Malic (C) +0.6 +0.1 -0.5 -0.1 +0.1
nitrogen source D-Serine (N) -0.1 -0.1 +0.4 -0.2 +0.1
stress Rifampicin 0.0016 mg/ml +0.2 +0.0 +0.6 -0.1 -0.3
stress nitrate 200 mM -0.3 +0.2 +0.7 -0.0 +0.1
survival 4C survival; 360 hrs +0.4 +0.1 -0.3 +0.1 +0.3
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.2 -0.0 +0.3 +0.1 +0.3
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.5 +0.1 +0.2 +0.1 +0.1
survival 4C survival; 1152 hrs +0.3 +0.1 +0.1 +0.1 +0.4
motility outer cut, LB soft agar motility assay +0.2 +0.2 +0.3 +0.0 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.7 +0.0 +1.0 -0.1 +0.1
stress KB-half, Pseudo5 supernatant +1.4 +0.1 +1.1 +0.2 +0.6
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +1.5 +0.3 +0.9 +0.5 +0.6
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