Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_10550 and AO356_10555 are separated by 352 nucleotidesAO356_10555 and AO356_10560 overlap by 11 nucleotidesAO356_10560 and AO356_10565 are separated by 37 nucleotidesAO356_10565 and AO356_10570 are separated by 358 nucleotides AO356_10550: AO356_10550 - taurine dioxygenase, at 2,384,249 to 2,385,151 _10550 AO356_10555: AO356_10555 - hemolysin secretion protein D, at 2,385,504 to 2,386,871 _10555 AO356_10560: AO356_10560 - ABC transporter, at 2,386,861 to 2,389,017 _10560 AO356_10565: AO356_10565 - channel protein TolC, at 2,389,055 to 2,390,404 _10565 AO356_10570: AO356_10570 - large adhesive protein, at 2,390,763 to 2,405,348 _10570
Group Condition AO356_10550 AO356_10555 AO356_10560 AO356_10565 AO356_10570
stress acetate 40 mM -0.1 -1.3 -1.3 -1.1 -1.3
stress Cholin acetate 40 mM -0.0 -1.3 -1.1 -1.2 -1.2
pH Minimal media pH6 -0.0 -1.5 -1.3 -0.5 -1.2
pH Minimal media pH6 -0.1 -1.4 -1.2 -0.6 -1.3
stress Cholin acetate 20 mM -0.1 -1.0 -1.1 -1.1 -0.9
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.2 -1.0 -1.0 -1.1 -0.9
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.3 -0.9 -1.0 -1.0 -0.9
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.0 -0.9 -0.9 -0.8 -0.7
stress Cephalothin 2 mg/ml -0.3 -0.7 -0.8 -0.6 -0.6
carbon source D-Lactate (C) -0.1 +0.7 +0.5 +0.4 +0.7
carbon source D-Gluconic Acid (C) -0.2 +0.7 +0.6 +0.4 +0.7
nitrogen source Adenine (N) -0.0 +0.6 +0.7 +0.3 +0.7
nitrogen source Thymine (N) -0.1 +0.8 +0.7 +0.3 +0.7
nitrogen source Inosine (N) -0.1 +0.9 +0.7 +0.2 +0.7
carbon source D-Fructose (C) -0.1 +0.7 +0.6 +0.5 +0.7
nitrogen source Putrescine (N) +0.0 +0.7 +0.6 +0.4 +0.7
carbon source D-Mannose (C) +0.0 +0.6 +0.7 +0.5 +0.6
carbon source L-Leucine (C) -0.0 +0.8 +0.7 +0.5 +0.8
stress Nickel (II) chloride 0.625 mM -0.0 +0.6 +0.7 +0.8 +0.7
carbon source casaminos (C) +0.0 +0.7 +0.7 +0.6 +0.8
carbon source L-Lactate (C) -0.1 +0.8 +0.8 +0.5 +0.8
carbon source L-Isoleucine (C) -0.1 +0.9 +0.7 +0.6 +0.7
carbon source D-Xylose (C) -0.3 +0.9 +1.0 +0.4 +0.9
carbon source D,L-Lactate (C) -0.0 +0.9 +0.8 +0.6 +1.0
carbon source L-Arabinose (C) -0.0 +1.1 +1.0 +0.6 +1.0
carbon source D-Galactose (C) +0.1 +1.1 +1.0 +0.6 +1.1
carbon source L-Lactate (C) +0.0 +1.1 +1.2 +0.6 +1.1
carbon source Fumarate (C) +0.0 +1.1 +1.1 +0.6 +1.2
nitrogen source D-Glucosamine Hydrochloride (N) +0.2 +1.5 +1.3 +0.3 +1.2
carbon source D-Gluconic Acid (C) -0.2 +1.3 +1.3 +0.8 +1.3
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