Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_10525 and AO356_10535 are separated by 1063 nucleotidesAO356_10535 and AO356_10540 are separated by 11 nucleotidesAO356_10540 and AO356_10545 are separated by 5 nucleotidesAO356_10545 and AO356_10550 are separated by 37 nucleotides AO356_10525: AO356_10525 - cell division protein, at 2,379,890 to 2,380,378 _10525 AO356_10535: AO356_10535 - ABC transporter permease, at 2,381,442 to 2,382,308 _10535 AO356_10540: AO356_10540 - sulfonate ABC transporter ATP-binding protein, at 2,382,320 to 2,383,180 _10540 AO356_10545: AO356_10545 - nitrate ABC transporter substrate-binding protein, at 2,383,186 to 2,384,211 _10545 AO356_10550: AO356_10550 - taurine dioxygenase, at 2,384,249 to 2,385,151 _10550
Group Condition AO356_10525 AO356_10535 AO356_10540 AO356_10545 AO356_10550
anaerobic Nitrate reduction with yeast extract -0.6 -0.2 -0.7 -0.2 -0.0
motility outer cut, LB soft agar motility assay -0.2 -0.2 -1.3 -0.2 +0.2
carbon source L-Lysine (C) -0.6 +0.0 -0.5 -0.1 -0.1
carbon source D-Xylose (C) -0.3 -0.1 -0.7 -0.0 -0.1
carbon source L-Aspartic Acid (C) -0.0 -0.0 -0.7 -0.2 -0.0
carbon source NAG (C) -0.2 -0.0 -0.3 -0.2 +0.1
carbon source Carbon source Sucrose 5 mM +0.1 -0.0 -0.7 -0.1 +0.1
survival 4C survival; 192 hrs -0.3 +0.1 -0.2 +0.0 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.4 +0.1 -0.3 +0.0 -0.0
carbon source Carbon source D-Mannitol 10 mM +0.1 +0.0 -0.6 -0.2 +0.1
stress nitrite 10 mM +0.3 +0.1 -0.6 -0.1 -0.1
carbon source Carbon source Sucrose 10 mM +0.3 -0.1 -0.4 -0.0 -0.1
carbon source Carbon source D-Mannitol 10 mM +0.2 +0.1 -0.3 -0.1 -0.2
carbon source D-Gluconic Acid (C) -0.1 -0.2 +0.3 -0.0 -0.2
stress Chlorite 0.04 mM +0.2 +0.0 -0.5 +0.0 -0.0
motility outer cut, LB soft agar motility assay -0.2 -0.2 +0.3 -0.3 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.4 -0.1 -0.2 +0.0 -0.2
stress Cisplatin 0.0032 mg/ml +0.2 -0.1 +0.2 -0.2 -0.1
stress Lomefloxacin 0.0005 mM -0.3 -0.2 +0.1 +0.2 +0.1
stress Rifampicin 0.0016 mg/ml +0.2 +0.1 -0.4 -0.0 +0.1
stress copper (II) chloride 2.5 mM -0.1 +0.0 -0.4 +0.3 +0.1
carbon source Carbon source D-Mannitol 5 mM +0.1 +0.1 -0.4 -0.0 +0.2
stress Cholin acetate 40 mM +0.4 -0.1 -0.1 -0.1 -0.0
resistance 20 mM putrescine -0.2 -0.2 +0.5 -0.0 +0.1
carbon source L-Arabinose (C) +0.1 -0.1 +0.5 -0.1 -0.0
stress Chloramphenicol 0.005 mg/ml +0.2 +0.2 -0.2 +0.1 +0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.1 -0.1 +0.3 -0.1 +0.2
pH Minimal media pH8 +0.1 +0.1 +0.3 +0.2 -0.1
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.1 +0.1 +0.4 +0.1 +0.1
nitrogen source L-tyrosine (N) +0.3 +0.2 +0.4 +0.0 -0.1
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