Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_10405 and AO356_10410 overlap by 4 nucleotidesAO356_10410 and AO356_10415 overlap by 4 nucleotidesAO356_10415 and AO356_10420 overlap by 20 nucleotidesAO356_10420 and AO356_10425 are separated by 494 nucleotides AO356_10405: AO356_10405 - glutamine ABC transporter substrate-binding protein, at 2,349,234 to 2,350,115 _10405 AO356_10410: AO356_10410 - glutamine ABC transporter ATP-binding protein, at 2,350,112 to 2,350,894 _10410 AO356_10415: AO356_10415 - glutamine ABC transporter permease, at 2,350,891 to 2,351,550 _10415 AO356_10420: AO356_10420 - polar amino acid ABC transporter permease, at 2,351,531 to 2,352,196 _10420 AO356_10425: AO356_10425 - methionine ABC transporter substrate-binding protein, at 2,352,691 to 2,353,473 _10425
Group Condition AO356_10405 AO356_10410 AO356_10415 AO356_10420 AO356_10425
carbon source L-Lysine (C) -0.1 -0.2 -0.3 -0.1 -0.1
stress nitrite 10 mM +0.2 -0.6 -0.1 -0.1 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.1 +0.3 +0.1 -0.3 -0.5
nitrogen source Urea (N) +0.0 -0.6 +0.4 -0.1 -0.0
stress copper (II) chloride 2.5 mM +0.4 -0.5 -0.2 +0.1 -0.1
carbon source Carbon source D-Mannitol 5 mM -0.2 +0.1 -0.3 -0.1 +0.2
carbon source D-Lactate (C) +0.1 +0.2 -0.3 -0.1 -0.1
carbon source L-Aspartic Acid (C) -0.0 +0.4 -0.3 -0.1 -0.2
nitrogen source L-tyrosine (N) +0.2 -0.4 +0.1 -0.1 +0.0
stress KB-half, Pseudo5 supernatant -0.0 +0.5 +0.0 -0.1 -0.4
carbon source Carbon source D-Mannitol 2.5 mM -0.1 +0.4 -0.1 -0.1 -0.1
stress Cholin acetate 40 mM -0.4 +0.3 +0.1 -0.0 -0.0
carbon source succinate (C) +0.2 +0.3 -0.2 -0.1 -0.1
stress Thallium(I) acetate 0.008 mg/ml +0.2 +0.3 -0.1 -0.1 -0.3
motility outer cut, LB soft agar motility assay -0.2 -0.1 +0.5 -0.1 -0.1
stress Cobalt chloride 0.08 mM +0.3 +0.1 -0.1 -0.2 -0.1
stress Paraquat dichloride 0.0625 mg/ml +0.2 +0.3 +0.1 -0.3 -0.2
stress D-Cycloserine 0.1 mg/ml +0.2 +0.1 -0.3 +0.2 -0.0
lb LB +0.2 +0.2 -0.3 +0.0 -0.1
carbon source L-Lactate (C) +0.2 +0.3 -0.1 -0.1 -0.2
nitrogen source Gly-Glu (N) -0.1 +0.4 -0.1 +0.0 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 +0.7 -0.1 +0.0 +0.0
stress 1-ethyl-3-methylimidazolium acetate 5 mM -0.2 +0.4 +0.2 +0.0 +0.0
carbon source Carbon source Sucrose 5 mM -0.1 +0.5 +0.2 -0.0 -0.0
stress nitrate 200 mM -0.0 +0.6 -0.2 +0.2 +0.0
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.1 +0.3 +0.2 +0.2 +0.1
motility outer cut, LB soft agar motility assay +0.1 +0.4 +0.4 +0.0 -0.1
motility outer cut, LB soft agar motility assay +0.3 +0.7 -0.1 -0.3 +0.4
stress Sisomicin 0.001 mg/ml +0.3 +0.7 +0.0 +0.2 -0.1
anaerobic Nitrate reduction with yeast extract +0.5 +0.5 +0.2 +0.1 +0.1
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