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Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2C3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AO356_10070 and AO356_10075 are separated by 150 nucleotides
AO356_10075 and AO356_10080 overlap by 4 nucleotides
AO356_10080 and AO356_10085 are separated by 88 nucleotides
AO356_10085 and AO356_10090 are separated by 111 nucleotides
AO356_10070: AO356_10070 - thioesterase, at 2,273,110 to 2,273,565
_10070
AO356_10075: AO356_10075 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 2,273,716 to 2,274,543
_10075
AO356_10080: AO356_10080 - ADP-ribose diphosphatase, at 2,274,540 to 2,275,106
_10080
AO356_10085: AO356_10085 - haloacid dehalogenase, at 2,275,195 to 2,275,857
_10085
AO356_10090: AO356_10090 - peptidoglycan-binding protein LysM, at 2,275,969 to 2,276,409
_10090
Group
Condition
AO356
_10070
AO356
_10075
AO356
_10080
AO356
_10085
AO356
_10090
carbon source
L-Arginine (C)
-0.1
-4.3
-0.5
+0.1
+0.2
carbon source
L-Isoleucine (C)
-0.1
-3.5
-1.0
+0.2
-0.0
carbon source
L-Arginine (C)
+0.1
-4.0
-0.5
+0.0
-0.0
carbon source
Tween 20 (C)
-0.1
-3.2
-0.6
-0.1
-0.0
carbon source
Glycerol (C)
+0.1
-3.8
-0.5
+0.1
+0.2
carbon source
Cytidine (C)
+0.1
-3.4
-0.4
+0.0
-0.1
carbon source
Tween 20 (C)
-0.1
-3.4
-0.5
+0.1
+0.4
carbon source
Inosine (C)
+0.0
-2.8
-0.6
-0.0
-0.0
carbon source
D-Glucosamine Hydrochloride (C)
-0.2
-2.6
-0.4
-0.3
+0.1
nitrogen source
L-Leucine (N)
-0.4
-2.0
-0.5
-0.2
+0.3
carbon source
L-Leucine (C)
-0.1
-2.2
-0.7
+0.0
+0.2
carbon source
Glycerol (C)
-0.1
-2.2
-0.5
+0.0
+0.1
nitrogen source
Gly-Glu (N)
-0.2
-2.4
-0.4
-0.1
+0.3
nitrogen source
D-Serine (N)
-0.3
-2.4
-0.3
+0.1
+0.3
carbon source
Carbon source D-Mannitol 10 mM
-0.2
-1.8
-0.2
-0.2
+0.1
carbon source
D-Alanine (C)
-0.5
-1.5
-0.5
+0.1
+0.1
carbon source
D-Sorbitol (C)
+0.1
-2.1
-0.4
+0.1
+0.1
carbon source
D-Fructose (C)
+0.1
-1.4
-0.5
-0.1
-0.3
carbon source
D-Sorbitol (C)
+0.2
-1.9
-0.3
-0.1
+0.1
carbon source
L-Alanine (C)
-0.2
-1.7
-0.2
+0.1
+0.2
carbon source
Ethanol (C)
+0.0
-1.9
-0.3
+0.1
+0.2
carbon source
Carbon source Sucrose 2.5 mM
-0.1
-1.4
-0.4
-0.1
+0.3
carbon source
m-Inositol (C)
+0.1
-1.7
-0.3
+0.0
+0.2
carbon source
D-Fructose (C)
+0.6
-1.3
-0.3
-0.4
+0.1
stress
methylglyoxal 0.016 vol%
+0.0
-1.1
-0.3
+0.4
+0.4
carbon source
L-Asparagine (C)
-0.4
+1.3
+0.7
-0.2
+0.1
stress
1-ethyl-3-methylimidazolium chloride 200 mM
-0.1
+1.8
+0.9
-0.2
-0.4
carbon source
D-Xylose (C)
-0.0
+1.5
+0.8
-0.2
+0.1
stress
Choline chloride 500 mM
+0.2
+1.4
+0.6
-0.1
+0.1
carbon source
D-Xylose (C)
+0.3
+1.5
+0.8
-0.2
-0.0
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