Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_09750 and AO356_09755 are separated by 203 nucleotidesAO356_09755 and AO356_09760 are separated by 39 nucleotidesAO356_09760 and AO356_09765 are separated by 1 nucleotidesAO356_09765 and AO356_09770 are separated by 152 nucleotides AO356_09750: AO356_09750 - rRNA methylase, at 2,212,096 to 2,212,551 _09750 AO356_09755: AO356_09755 - preprotein translocase subunit SecB, at 2,212,755 to 2,213,237 _09755 AO356_09760: AO356_09760 - glutaredoxin, at 2,213,277 to 2,213,531 _09760 AO356_09765: AO356_09765 - sulfurtransferase, at 2,213,533 to 2,213,946 _09765 AO356_09770: AO356_09770 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 2,214,099 to 2,215,628 _09770
Group Condition AO356_09750 AO356_09755 AO356_09760 AO356_09765 AO356_09770
survival 4C survival; 1152 hrs +0.1 -3.2 -1.0 -4.0 N.D.
survival 4C survival; 672 hrs -0.0 -3.2 -0.4 -3.9 N.D.
survival 4C survival; 360 hrs +0.1 -3.9 -0.8 -2.8 N.D.
stress Choline chloride 300 mM +0.0 -2.3 -0.8 -3.6 N.D.
survival 4C survival; 192 hrs -0.0 -3.1 -0.8 -2.2 N.D.
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.7 -1.3 -1.2 -2.2 N.D.
stress Choline chloride 500 mM +0.0 -2.3 -0.9 -2.0 N.D.
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.5 -4.0 -1.0 -0.7 N.D.
stress nitrate 200 mM -0.0 -2.2 -0.3 -2.2 N.D.
carbon source L-Lysine (C) +0.2 -0.4 -0.4 -3.8 N.D.
stress copper (II) chloride 2.5 mM +0.4 -1.7 -0.0 -3.0 N.D.
stress Chlorite 0.04 mM +0.1 -0.5 +0.1 -3.9 N.D.
stress Chlorite 0.08 mM +0.1 -1.2 -0.3 -2.3 N.D.
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.5 -0.5 -1.0 -2.2 N.D.
nitrogen source D-Serine (N) +0.4 -0.1 -1.3 -2.1 N.D.
carbon source acetate (C) -0.1 +0.1 -0.4 -2.8 N.D.
carbon source Carbon source Sucrose 5 mM +0.1 -0.8 -1.1 -1.1 N.D.
carbon source D-Trehalose (C) +0.1 -0.8 -1.0 -0.8 N.D.
carbon source D-Xylose (C) +0.3 -0.5 -0.4 -1.5 N.D.
stress Sisomicin 0.001 mg/ml +0.4 +0.4 -0.2 -2.5 N.D.
stress sodium fluoride 6.25 mM +0.0 +0.4 +0.1 -2.4 N.D.
anaerobic Nitrate reduction with yeast extract +0.5 +0.4 -1.0 -1.6 N.D.
motility outer cut, LB soft agar motility assay +0.1 +0.6 +1.0 +1.5 N.D.
stress Doxycycline hyclate 0.0001 mg/ml +0.2 +0.5 +1.1 +1.3 N.D.
carbon source Fumarate (C) +0.5 +0.6 +0.7 +1.3 N.D.
motility outer cut, LB soft agar motility assay -0.5 +1.0 +1.8 +1.2 N.D.
stress Lomefloxacin 0.0005 mM -0.1 +0.6 +1.3 +1.7 N.D.
nitrogen source Adenosine (N) +0.4 +1.0 +1.0 +1.7 N.D.
stress methylglyoxal 0.016 vol% +0.1 +1.3 +1.4 +2.7 N.D.
stress Benzalkonium Chloride 0.016 mg/ml -0.2 +3.4 +2.5 +3.5 N.D.
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