Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_09635 and AO356_09640 overlap by 4 nucleotidesAO356_09640 and AO356_09645 are separated by 104 nucleotidesAO356_09645 and AO356_09650 are separated by 122 nucleotidesAO356_09650 and AO356_09655 are separated by 31 nucleotides AO356_09635: AO356_09635 - histidine utilization regulatory protein hutD (from data), at 2,183,367 to 2,183,936 _09635 AO356_09640: AO356_09640 - histidine utilization repressor, at 2,183,933 to 2,184,682 _09640 AO356_09645: AO356_09645 - Formiminoglutamic iminohydrolase (EC 3.5.3.13) (from data), at 2,184,787 to 2,186,151 _09645 AO356_09650: AO356_09650 - lipocalin, at 2,186,274 to 2,186,843 _09650 AO356_09655: AO356_09655 - hypothetical protein, at 2,186,875 to 2,187,129 _09655
Group Condition AO356_09635 AO356_09640 AO356_09645 AO356_09650 AO356_09655
carbon source L-Histidine (C) -4.7 +1.8 -4.5 -0.0 +0.0
carbon source L-Histidine (C) -2.6 +1.5 -4.2 +0.1 -0.1
nitrogen source Inosine (N) +0.1 -3.9 +0.1 +0.0 +0.2
carbon source Inosine (C) +0.0 -1.9 +0.0 +0.0 -0.2
carbon source D-Lactate (C) -0.1 -1.4 +0.1 +0.0 -0.3
nitrogen source Gly-Glu (N) +0.1 -1.4 -0.1 -0.0 -0.0
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.2 -2.0 +0.1 +0.3 +0.3
carbon source D-Trehalose (C) +0.0 -1.3 -0.0 +0.2 -0.3
motility outer cut, LB soft agar motility assay -0.9 +0.4 -0.4 -0.2 -0.2
carbon source D-Fructose (C) -0.1 -1.2 -0.1 -0.0 +0.1
resistance 20 mM putrescine +0.2 -1.5 -0.1 +0.1 +0.1
nitrogen source D-Serine (N) +0.2 -1.3 +0.0 +0.1 -0.2
anaerobic Nitrate reduction with yeast extract -0.7 +0.0 -0.4 -0.1 +0.1
carbon source L-Arginine (C) -0.1 -1.0 +0.1 -0.0 -0.1
nitrogen source Uridine (N) +0.1 -1.4 -0.1 +0.1 +0.2
carbon source L-Lysine (C) +0.1 -1.0 -0.1 -0.1 +0.1
carbon source L-Glutamine (C) +0.1 -1.2 +0.0 +0.0 -0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.1 -1.1 -0.2 +0.2 +0.3
carbon source Carbon source D-Mannitol 10 mM -0.4 -0.6 +0.1 +0.3 -0.3
carbon source D,L-Lactate (C) -0.1 -1.0 -0.0 +0.1 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.0 -0.9 -0.1 +0.1 +0.2
carbon source D-Trehalose (C) +0.2 -0.9 +0.1 +0.2 -0.2
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.0 -1.1 +0.1 +0.2 +0.1
carbon source D-Lactate (C) +0.1 -1.1 +0.0 +0.1 +0.3
carbon source acetate (C) +0.1 -0.8 -0.1 +0.0 +0.3
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.1 -0.8 -0.1 +0.1 +0.3
carbon source L-Leucine (C) +0.1 -0.7 -0.1 +0.3 +0.1
stress Lomefloxacin 0.0005 mM -0.4 -0.4 +0.2 +0.1 +0.2
survival 4C survival; 1152 hrs -0.3 -0.1 +0.1 -0.5 +0.7
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.5 +0.3 +0.3 +0.2 +0.2
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