Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_09615 and AO356_09620 are separated by 71 nucleotidesAO356_09620 and AO356_09625 are separated by 69 nucleotidesAO356_09625 and AO356_09630 are separated by 150 nucleotidesAO356_09630 and AO356_09635 are separated by 459 nucleotides AO356_09615: AO356_09615 - ABC transporter for L-Histidine, permease component (from data), at 2,177,641 to 2,178,492 _09615 AO356_09620: AO356_09620 - ABC transporter for L-Histidine, periplasmic substrate-binding component (from data), at 2,178,564 to 2,179,532 _09620 AO356_09625: AO356_09625 - sulfonate ABC transporter substrate-binding protein, at 2,179,602 to 2,181,068 _09625 AO356_09630: AO356_09630 - Urocanate hydratase (EC 4.2.1.49) (from data), at 2,181,219 to 2,182,907 _09630 AO356_09635: AO356_09635 - histidine utilization regulatory protein hutD (from data), at 2,183,367 to 2,183,936 _09635
Group Condition AO356_09615 AO356_09620 AO356_09625 AO356_09630 AO356_09635
carbon source L-Histidine (C) -6.6 -3.7 -4.0 -4.9 -4.7
carbon source L-Histidine (C) -5.5 -4.4 -4.3 -4.8 -2.6
pH Minimal media pH9 -0.4 -0.3 -0.3 -0.2 -0.1
carbon source succinate (C) -0.8 -0.1 -0.0 +0.1 -0.2
motility outer cut, LB soft agar motility assay -0.2 -0.2 +0.2 -0.0 -0.9
stress Lomefloxacin 0.0005 mM -0.6 -0.2 +0.1 +0.0 -0.4
survival 4C survival; 360 hrs -0.5 -0.1 +0.0 -0.2 -0.2
stress Cobalt chloride 0.08 mM -0.9 -0.1 +0.0 +0.1 +0.0
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.4 -0.2 +0.0 +0.1 -0.2
stress Ceftazidime 0.2 mg/ml -0.6 -0.2 -0.0 +0.1 -0.1
stress Aluminum chloride 5 mM -0.7 -0.0 +0.0 -0.0 +0.1
stress Spectinomycin 0.0125 mg/ml -0.7 +0.1 +0.1 +0.0 -0.2
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.6 -0.0 +0.1 +0.1 -0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.4 -0.3 +0.1 +0.1 -0.1
anaerobic Nitrate reduction with yeast extract +0.3 -0.3 -0.1 +0.2 -0.7
motility outer cut, LB soft agar motility assay +0.2 -0.2 -0.1 +0.1 -0.3
stress copper (II) chloride 2.5 mM -0.9 +0.1 +0.1 +0.1 +0.2
stress Spectinomycin 0.025 mg/ml -0.3 -0.1 -0.1 +0.2 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.1 -0.2 -0.2 -0.1 +0.5
carbon source acetate (C) -0.4 +0.1 +0.1 +0.1 +0.1
stress Sisomicin 0.001 mg/ml +0.3 -0.2 -0.1 +0.2 +0.1
stress Cholin acetate 40 mM +0.5 -0.1 +0.1 +0.0 -0.2
carbon source L-Lysine (C) +0.6 -0.0 -0.3 +0.1 +0.1
stress KB-half, Pseudo5 supernatant +0.4 +0.2 -0.1 -0.0 +0.2
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.8 -0.1 -0.0 -0.0 +0.0
nitrogen source D-Serine (N) +0.6 +0.1 -0.1 +0.1 +0.2
carbon source Glycerol (C) -0.3 +0.3 +0.2 +0.3 +0.2
carbon source Carbon source Sucrose 2.5 mM +0.7 -0.0 +0.2 -0.0 +0.0
carbon source L-Alanine (C) +0.5 -0.1 +0.2 +0.1 +0.2
carbon source Glycerol (C) +0.5 +0.2 +0.2 +0.2 +0.2
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