Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_09480 and AO356_09485 are separated by 60 nucleotidesAO356_09485 and AO356_09490 are separated by 207 nucleotidesAO356_09490 and AO356_09495 are separated by 10 nucleotidesAO356_09495 and AO356_09500 are separated by 266 nucleotides AO356_09480: AO356_09480 - poly(R)-hydroxyalkanoic acid synthase, at 2,148,712 to 2,150,394 _09480 AO356_09485: AO356_09485 - TetR family transcriptional regulator, at 2,150,455 to 2,151,075 _09485 AO356_09490: AO356_09490 - poly(3-hydroxyalkanoate) granule-associated protein PhaF, at 2,151,283 to 2,152,194 _09490 AO356_09495: AO356_09495 - poly(3-hydroxyalkanoate) granule-associated protein PhaI, at 2,152,205 to 2,152,627 _09495 AO356_09500: AO356_09500 - polyhydroxyalkanoic acid system protein, at 2,152,894 to 2,153,169 _09500
Group Condition AO356_09480 AO356_09485 AO356_09490 AO356_09495 AO356_09500
stress nitrate 200 mM -0.1 -0.3 -0.3 -0.2 -1.4
resistance 20 mM putrescine -0.1 -0.1 -1.0 -0.2 -0.6
carbon source acetate (C) -0.2 +0.1 -1.2 -0.3 -0.3
temperature LB 20C +0.1 -0.2 -0.3 -0.2 -1.1
carbon source L-Proline (C) +0.1 -0.0 -1.1 +0.1 -0.6
nitrogen source Urea (N) -0.1 -0.1 -0.6 -0.5 -0.3
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.0 -0.2 -0.5 -0.3 -0.6
stress KB-half, Pseudo5 supernatant -0.2 -0.5 -1.2 -0.6 +1.0
nitrogen source L-Phenylalanine (N) -0.1 -0.2 -0.5 -0.7 +0.0
nitrogen source D-Serine (N) +0.2 +0.5 -1.0 -0.5 -0.7
nitrogen source L-tyrosine (N) -0.1 +0.2 -0.4 -0.4 -0.6
stress Chlorite 0.08 mM -0.1 -0.3 +0.3 -0.2 -0.9
stress Spectinomycin 0.0125 mg/ml +0.0 -0.5 +0.1 -0.3 -0.7
carbon source Carnitine Hydrochloride (C) +0.0 +0.0 -1.2 +0.0 +0.3
nitrogen source Gly-Glu (N) +0.1 +0.4 -0.6 -0.1 -0.3
stress Sisomicin 0.001 mg/ml -0.2 +0.1 +0.6 -0.6 -0.2
motility outer cut, LB soft agar motility assay +0.2 -0.1 -1.4 +0.7 +0.4
carbon source L-Malic (C) +0.0 +0.2 -0.7 +0.1 +0.6
carbon source L-Lysine (C) -0.1 +0.5 +0.7 -0.0 -0.9
anaerobic Nitrate reduction with yeast extract +0.5 +0.4 +0.3 -0.4 -0.6
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.3 -0.4 -0.3 -0.0 +0.9
motility outer cut, LB soft agar motility assay +0.2 +0.2 -0.4 +0.2 +0.5
carbon source D-Trehalose (C) +0.2 +0.3 +0.6 +0.5 -0.2
carbon source D-Trehalose (C) +0.1 +0.3 +0.4 +0.6 +0.1
carbon source Putrescine (C) +0.1 +0.2 +0.7 +0.2 +0.3
carbon source Inosine (C) +0.2 +0.3 +0.5 +0.2 +0.6
stress copper (II) chloride 2.5 mM +0.3 +0.6 +0.5 +0.4 +0.3
survival 4C survival; 1152 hrs +0.2 +0.2 +1.9 -0.3 +0.4
carbon source Ethanol (C) +0.3 +0.3 +0.7 +0.8 +0.5
carbon source Ethanol (C) +0.2 +0.5 +0.7 +0.5 +0.7
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