Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_09395 and AO356_09400 overlap by 4 nucleotidesAO356_09400 and AO356_09405 overlap by 4 nucleotidesAO356_09405 and AO356_09410 overlap by 4 nucleotidesAO356_09410 and AO356_09415 overlap by 1 nucleotides AO356_09395: AO356_09395 - fimbrial protein, at 2,127,317 to 2,129,404 _09395 AO356_09400: AO356_09400 - pilus assembly protein PilP, at 2,129,401 to 2,129,949 _09400 AO356_09405: AO356_09405 - pilus assembly protein PilP, at 2,129,946 to 2,130,569 _09405 AO356_09410: AO356_09410 - pilus assembly protein PilN, at 2,130,566 to 2,131,132 _09410 AO356_09415: AO356_09415 - pilus assembly protein PilM, at 2,131,132 to 2,132,196 _09415
Group Condition AO356_09395 AO356_09400 AO356_09405 AO356_09410 AO356_09415
stress Sisomicin 0.001 mg/ml -0.1 -0.8 -0.0 -0.5 +0.2
nitrogen source D-Serine (N) +0.1 -0.4 -0.4 -0.2 -0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.6 -0.5 -0.1 +0.3 -0.0
stress perchlorate 75 mM -0.1 -0.3 -0.2 -0.2 -0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.3 -0.3 -0.2 -0.0 -0.1
stress nitrite 10 mM -0.6 -0.1 -0.1 -0.1 +0.2
anaerobic Nitrate reduction with yeast extract -0.3 +0.2 +0.1 -0.5 -0.2
carbon source Tween 20 (C) +0.0 -0.1 -0.1 -0.4 +0.2
carbon source D-Xylose (C) +0.0 -0.1 +0.2 -0.6 +0.0
stress copper (II) chloride 2.5 mM -0.6 -0.1 -0.4 +0.2 +0.5
carbon source Glycerol (C) +0.2 -0.1 -0.1 -0.4 +0.1
carbon source Ethanol (C) +0.1 -0.1 -0.4 -0.1 +0.2
stress Chlorite 0.04 mM +0.3 -0.3 -0.2 +0.1 -0.2
pH Minimal media pH8 +0.1 -0.0 -0.2 +0.3 -0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 -0.1 +0.0 -0.1 +0.3
carbon source L-Glutamic (C) +0.2 -0.2 -0.0 -0.4 +0.2
carbon source L-Lysine (C) +0.4 -0.0 -0.0 -0.3 -0.1
carbon source D-Glucosamine Hydrochloride (C) -0.2 +0.1 -0.0 +0.3 -0.2
motility outer cut, LB soft agar motility assay +0.4 -0.5 +0.0 -0.3 +0.4
stress Cobalt chloride 0.08 mM -0.4 +0.2 +0.1 -0.2 +0.3
carbon source D-Lactate (C) +0.2 +0.2 -0.2 -0.2 +0.3
stress Nalidixic 0.004 mg/ml +0.0 +0.2 -0.0 +0.5 -0.2
motility outer cut, LB soft agar motility assay +0.2 -0.2 +0.3 +0.2 +0.1
carbon source Carbon source D-Mannitol 10 mM +0.4 +0.2 +0.3 -0.3 +0.0
motility outer cut, LB soft agar motility assay +0.7 +0.0 -0.2 +0.2 +0.1
stress Cobalt chloride 0.08 mM +0.1 +0.1 +0.3 +0.2 +0.1
survival 4C survival; 1152 hrs -0.1 +0.1 +0.3 +0.4 +0.2
motility outer cut, LB soft agar motility assay +0.1 +0.1 +0.1 +0.4 +0.6
stress Doxycycline hyclate 0.0001 mg/ml +0.4 +0.3 +0.4 +0.2 +0.2
stress Rifampicin 0.0024 mg/ml +0.4 +0.8 +0.4 +0.2 +0.1
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