Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 198 experiments or choose conditions or try the comparative fitness browser

500 ntAO356_09390 and AO356_09395 are separated by 4 nucleotidesAO356_09395 and AO356_09400 overlap by 4 nucleotidesAO356_09400 and AO356_09405 overlap by 4 nucleotidesAO356_09405 and AO356_09410 overlap by 4 nucleotides AO356_09390: AO356_09390 - shikimate kinase, at 2,126,794 to 2,127,312 _09390 AO356_09395: AO356_09395 - fimbrial protein, at 2,127,317 to 2,129,404 _09395 AO356_09400: AO356_09400 - pilus assembly protein PilP, at 2,129,401 to 2,129,949 _09400 AO356_09405: AO356_09405 - pilus assembly protein PilP, at 2,129,946 to 2,130,569 _09405 AO356_09410: AO356_09410 - pilus assembly protein PilN, at 2,130,566 to 2,131,132 _09410
Group Condition AO356_09390 AO356_09395 AO356_09400 AO356_09405 AO356_09410
stress Sisomicin 0.001 mg/ml N.D. -0.1 -0.8 -0.0 -0.5
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. -0.6 -0.5 -0.1 +0.3
nitrogen source D-Serine (N) N.D. +0.1 -0.4 -0.4 -0.2
stress copper (II) chloride 2.5 mM N.D. -0.6 -0.1 -0.4 +0.2
stress nitrite 10 mM N.D. -0.6 -0.1 -0.1 -0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. -0.3 -0.3 -0.2 -0.0
stress perchlorate 75 mM N.D. -0.1 -0.3 -0.2 -0.2
carbon source Tween 20 (C) N.D. +0.0 -0.1 -0.1 -0.4
carbon source Ethanol (C) N.D. +0.1 -0.1 -0.4 -0.1
anaerobic Nitrate reduction with yeast extract N.D. -0.3 +0.2 +0.1 -0.5
carbon source Glycerol (C) N.D. +0.2 -0.1 -0.1 -0.4
carbon source D-Xylose (C) N.D. +0.0 -0.1 +0.2 -0.6
motility outer cut, LB soft agar motility assay N.D. +0.4 -0.5 +0.0 -0.3
carbon source L-Glutamic (C) N.D. +0.2 -0.2 -0.0 -0.4
carbon source L-Lysine (C) N.D. +0.2 -0.1 -0.3 -0.1
stress Cobalt chloride 0.08 mM N.D. -0.4 +0.2 +0.1 -0.2
stress Chlorite 0.08 mM N.D. -0.3 +0.1 -0.1 +0.2
nitrogen source Urea (N) N.D. +0.1 +0.2 -0.1 -0.3
stress Chlorite 0.04 mM N.D. +0.3 -0.3 -0.2 +0.1
carbon source D-Lactate (C) N.D. +0.2 +0.2 -0.2 -0.2
carbon source L-Lysine (C) N.D. +0.4 -0.0 -0.0 -0.3
temperature LB 37C N.D. +0.2 -0.1 -0.1 +0.3
motility outer cut, LB soft agar motility assay N.D. +0.2 -0.2 +0.3 +0.2
carbon source Carbon source D-Mannitol 10 mM N.D. +0.4 +0.2 +0.3 -0.3
stress Nalidixic 0.004 mg/ml N.D. +0.0 +0.2 -0.0 +0.5
motility outer cut, LB soft agar motility assay N.D. +0.7 +0.0 -0.2 +0.2
stress Cobalt chloride 0.08 mM N.D. +0.1 +0.1 +0.3 +0.2
survival 4C survival; 1152 hrs N.D. -0.1 +0.1 +0.3 +0.4
stress Doxycycline hyclate 0.0001 mg/ml N.D. +0.4 +0.3 +0.4 +0.2
stress Rifampicin 0.0024 mg/ml N.D. +0.4 +0.8 +0.4 +0.2
remove
AO356_09390
plot
remove
AO356_09395
plot
remove
AO356_09400
remove
AO356_09405
plot
remove
AO356_09410
plot