Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_09345 and AO356_09350 are separated by 8 nucleotidesAO356_09350 and AO356_09355 overlap by 4 nucleotidesAO356_09355 and AO356_09360 are separated by 66 nucleotidesAO356_09360 and AO356_09365 are separated by 355 nucleotides AO356_09345: AO356_09345 - type II secretion system protein GspD, at 2,111,468 to 2,113,393 _09345 AO356_09350: AO356_09350 - hypothetical protein, at 2,113,402 to 2,113,929 _09350 AO356_09355: AO356_09355 - cytochrome B, at 2,113,926 to 2,114,468 _09355 AO356_09360: AO356_09360 - multidrug transporter, at 2,114,535 to 2,116,001 _09360 AO356_09365: AO356_09365 - uroporphyrinogen decarboxylase, at 2,116,357 to 2,117,424 _09365
Group Condition AO356_09345 AO356_09350 AO356_09355 AO356_09360 AO356_09365
stress Sisomicin 0.001 mg/ml +0.1 -0.4 -1.8 +0.2 N.D.
stress methylglyoxal 0.016 vol% -0.2 -0.5 -1.0 -0.1 N.D.
carbon source Carbon source Sucrose 10 mM +0.1 -1.1 -0.5 -0.0 N.D.
stress Cisplatin 0.0032 mg/ml -0.1 -0.9 -0.0 -0.3 N.D.
motility outer cut, LB soft agar motility assay +0.1 -0.0 -1.4 +0.0 N.D.
survival 4C survival; 1152 hrs -0.2 -0.7 -0.3 -0.1 N.D.
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.2 -0.6 -0.4 -0.1 N.D.
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.1 -1.4 +0.3 -0.3 N.D.
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 -0.8 -0.0 -0.2 N.D.
carbon source Carbon source Sucrose 5 mM -0.0 -0.8 -0.1 -0.1 N.D.
carbon source Glycerol (C) +0.0 -0.7 -0.3 -0.1 N.D.
lb LB +0.1 -0.5 -0.3 -0.1 N.D.
motility outer cut, LB soft agar motility assay -0.1 -0.3 -0.6 +0.2 N.D.
carbon source L-Asparagine (C) -0.1 -0.8 +0.1 +0.0 N.D.
stress Benzalkonium Chloride 0.008 mg/ml -0.1 -0.5 -0.3 +0.2 N.D.
carbon source L-Aspartic Acid (C) +0.1 -0.7 -0.1 -0.1 N.D.
carbon source Carbon source D,L-Lactate 10 mM +0.3 -0.4 -0.3 -0.2 N.D.
carbon source D-Fructose (C) -0.0 -0.7 +0.2 +0.0 N.D.
carbon source Carbon source D-Mannitol 10 mM +0.3 -0.4 -0.2 -0.1 N.D.
nitrogen source Adenine (N) -0.1 -0.7 +0.3 +0.1 N.D.
stress Chlorite 0.04 mM +0.2 -0.8 +0.1 +0.1 N.D.
pH Minimal media pH8 +0.1 +0.3 -0.7 -0.0 N.D.
stress nitrite 10 mM -0.1 +0.5 -0.6 -0.0 N.D.
stress KB-half, Pseudo5 supernatant +0.2 -0.4 +0.3 -0.2 N.D.
carbon source Carbon source D-Mannitol 10 mM -0.1 -0.5 +0.4 +0.1 N.D.
stress nitrate 200 mM +0.0 +0.7 -0.9 +0.1 N.D.
motility outer cut, LB soft agar motility assay -0.1 +0.7 -0.3 -0.1 N.D.
stress Vanillin 2.5 mM +0.1 -0.4 +0.5 +0.1 N.D.
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.0 +0.7 -0.2 +0.3 N.D.
carbon source D-Mannose (C) -0.0 +0.6 +0.3 +0.2 N.D.
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