Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_08990 and AO356_08995 are separated by 81 nucleotidesAO356_08995 and AO356_09000 overlap by 4 nucleotidesAO356_09000 and AO356_09005 are separated by 268 nucleotidesAO356_09005 and AO356_09010 are separated by 72 nucleotides AO356_08990: AO356_08990 - lactate dehydrogenase, at 2,032,380 to 2,033,219 _08990 AO356_08995: AO356_08995 - hypothetical protein, at 2,033,301 to 2,034,032 _08995 AO356_09000: AO356_09000 - type IV secretion protein Rhs, at 2,034,029 to 2,036,086 _09000 AO356_09005: AO356_09005 - hypothetical protein, at 2,036,355 to 2,036,852 _09005 AO356_09010: AO356_09010 - proline:sodium symporter PutP, at 2,036,925 to 2,038,409 _09010
Group Condition AO356_08990 AO356_08995 AO356_09000 AO356_09005 AO356_09010
carbon source L-Proline (C) +0.4 -0.2 -0.1 -0.5 -1.4
carbon source L-Proline (C) +0.0 -0.2 +0.1 -0.3 -1.3
carbon source L-Lysine (C) -0.6 -0.3 -0.2 -0.3 +0.0
stress Chlorite 0.04 mM -0.4 -0.1 -0.2 -0.2 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.3 +0.1 -0.2 -0.2 -0.3
stress nitrate 200 mM -0.1 -0.6 -0.1 -0.0 +0.0
carbon source D-Gluconic Acid (C) -0.6 -0.1 +0.1 -0.1 +0.1
stress perchlorate 75 mM -0.6 +0.0 -0.0 +0.2 +0.1
survival 4C survival; 1152 hrs -0.2 +0.2 -0.2 -0.2 +0.1
stress Benzalkonium Chloride 0.008 mg/ml -0.4 +0.1 -0.3 +0.1 +0.1
stress copper (II) chloride 2.5 mM +0.6 -0.3 -0.2 -0.1 -0.0
stress Sisomicin 0.001 mg/ml +0.0 -0.5 -0.0 +0.1 +0.2
carbon source pyruvate (C) -0.2 -0.3 +0.2 +0.2 +0.1
carbon source D-Ribose (C) -0.1 -0.2 +0.3 +0.1 -0.1
carbon source L-Malic (C) +0.2 -0.1 +0.2 -0.3 +0.1
stress Nickel (II) chloride 0.625 mM -0.2 -0.2 +0.3 +0.1 +0.0
motility outer cut, LB soft agar motility assay -0.1 -0.2 +0.4 -0.1 +0.1
stress Cobalt chloride 0.08 mM +0.1 -0.4 +0.3 +0.1 +0.1
anaerobic Nitrate reduction with yeast extract -0.1 -0.1 +0.5 -0.1 +0.2
motility outer cut, LB soft agar motility assay +0.4 -0.1 +0.3 -0.1 +0.0
carbon source D-Trehalose (C) +0.4 +0.1 -0.1 +0.1 +0.1
carbon source pyruvate (C) +0.1 -0.0 +0.4 +0.2 -0.1
stress Cisplatin 0.0032 mg/ml +0.4 +0.2 -0.0 +0.1 -0.1
motility outer cut, LB soft agar motility assay +0.5 -0.2 +0.3 +0.2 -0.1
stress Cholin acetate 20 mM +0.3 +0.3 -0.1 +0.1 +0.1
carbon source L-Alanine (C) -0.1 +0.1 +0.2 +0.2 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.8 -0.2 -0.1 +0.2 +0.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +1.3 +0.4 -0.2 +0.2 -0.4
stress KB-half, Pseudo5 supernatant +0.7 +0.7 +0.0 +0.2 -0.2
stress Lomefloxacin 0.0005 mM +0.6 +0.2 +0.3 +0.2 +0.1
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