Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_08390 and AO356_08395 are separated by 80 nucleotidesAO356_08395 and AO356_08400 are separated by 111 nucleotidesAO356_08400 and AO356_08405 are separated by 175 nucleotidesAO356_08405 and AO356_08410 are separated by 294 nucleotides AO356_08390: AO356_08390 - Urease (EC 3.5.1.5) (from data), at 1,883,826 to 1,885,526 _08390 AO356_08395: AO356_08395 - hypothetical protein, at 1,885,607 to 1,890,631 _08395 AO356_08400: AO356_08400 - chaperone modulatory protein CbpM, at 1,890,743 to 1,891,042 _08400 AO356_08405: AO356_08405 - DNA-binding protein, at 1,891,218 to 1,892,159 _08405 AO356_08410: AO356_08410 - heat-shock protein, at 1,892,454 to 1,893,728 _08410
Group Condition AO356_08390 AO356_08395 AO356_08400 AO356_08405 AO356_08410
nitrogen source Inosine (N) -5.0 +0.2 -0.9 -0.1 +0.3
nitrogen source Urea (N) -2.9 +0.1 -0.2 -0.1 +0.2
nitrogen source Adenine (N) -1.8 +0.0 -0.5 +0.0 -0.0
carbon source D-Lactate (C) -0.1 +0.0 -0.5 -0.4 -0.3
nitrogen source Adenosine (N) -0.5 +0.0 -0.8 -0.0 +0.1
motility outer cut, LB soft agar motility assay +0.5 -0.1 -1.6 +0.1 +0.1
carbon source Carbon source Sucrose 5 mM -0.1 +0.0 -0.6 -0.2 -0.0
carbon source Carbon source Sucrose 2.5 mM -0.1 +0.1 -0.6 -0.1 -0.3
carbon source Carbon source Sucrose 10 mM +0.1 +0.1 -1.2 +0.1 -0.1
carbon source D-Glucosamine Hydrochloride (C) +0.1 +0.0 -0.8 +0.0 -0.2
stress Bacitracin 2 mg/ml +0.0 -0.2 -0.6 -0.1 +0.1
stress Sisomicin 0.001 mg/ml +0.2 -0.0 -0.2 -0.6 -0.1
pH Minimal media pH7 -0.1 +0.0 -0.6 +0.1 -0.2
carbon source Carbon source D-Mannitol 5 mM -0.0 +0.0 -0.6 +0.2 -0.2
carbon source D-Mannose (C) -0.1 +0.0 -0.4 +0.2 -0.2
carbon source L-Isoleucine (C) -0.2 +0.0 -0.2 +0.2 -0.5
carbon source Carbon source D-Mannitol 5 mM -0.0 +0.1 -0.7 +0.1 -0.2
stress Benzalkonium Chloride 0.016 mg/ml +0.1 +0.1 -0.9 +0.0 +0.3
motility outer cut, LB soft agar motility assay -0.1 -0.1 -1.2 +0.5 +0.4
carbon source acetate (C) -0.2 -0.0 +0.5 -0.2 -0.3
carbon source L-Lysine (C) -0.0 +0.1 -0.5 +0.1 +0.3
survival 4C survival; 672 hrs +0.1 +0.1 -0.4 +0.2 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.6 +0.1 -0.8 +0.3 +0.1
stress KB-half, Pseudo5 supernatant +0.3 +0.1 -0.4 +0.2 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.1 -0.2 -0.3 +0.4
stress Choline chloride 300 mM -0.0 -0.0 +0.7 -0.1 +0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.0 +0.1 +1.0 -0.0 -0.2
stress Vanillin 2.5 mM +0.3 +0.0 +0.5 +0.3 +0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 -0.0 +1.1 +0.2 +0.1
stress methylglyoxal 0.016 vol% +0.1 -0.0 +1.1 +0.2 +0.3
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