Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_07940 and AO356_07945 are separated by 114 nucleotidesAO356_07945 and AO356_07950 are separated by 624 nucleotidesAO356_07950 and AO356_07955 are separated by 72 nucleotidesAO356_07955 and AO356_07960 are separated by 123 nucleotides AO356_07940: AO356_07940 - tRNA-Ile, at 1,778,715 to 1,778,791 _07940 AO356_07945: AO356_07945 - 16S ribosomal RNA, at 1,778,906 to 1,780,451 _07945 AO356_07950: AO356_07950 - methylmalonate-semialdehyde dehydrogenase, at 1,781,076 to 1,782,569 _07950 AO356_07955: AO356_07955 - omega amino acid--pyruvate aminotransferase, at 1,782,642 to 1,783,991 _07955 AO356_07960: AO356_07960 - LysR family transcriptional regulator, at 1,784,115 to 1,785,035 _07960
Group Condition AO356_07940 AO356_07945 AO356_07950 AO356_07955 AO356_07960
nitrogen source Uridine (N) N.D. N.D. -1.0 -3.8 -2.6
nitrogen source Thymine (N) N.D. N.D. -0.1 -2.1 -1.1
carbon source Cytidine (C) N.D. N.D. -0.6 -0.7 -0.3
nitrogen source Cytosine (N) N.D. N.D. -0.1 -0.9 -0.4
carbon source Uridine (C) N.D. N.D. -0.6 -0.5 -0.3
carbon source m-Inositol (C) N.D. N.D. -0.1 -0.7 -0.4
stress KB-half, Pseudo5 supernatant N.D. N.D. -0.3 -0.2 -0.4
pH Minimal media pH6 N.D. N.D. -0.2 -0.7 -0.0
carbon source Carbon source D-Mannitol 5 mM N.D. N.D. -0.1 -0.4 -0.2
carbon source L-Lysine (C) N.D. N.D. -0.0 -0.5 -0.1
carbon source m-Inositol (C) N.D. N.D. +0.0 -0.5 -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 N.D. N.D. -0.2 -0.1 -0.3
carbon source Carbon source D-Mannitol 10 mM N.D. N.D. -0.1 -0.3 -0.2
carbon source Carbon source D-Mannitol 10 mM N.D. N.D. -0.1 -0.4 -0.1
carbon source Carbon source D-Mannitol 5 mM N.D. N.D. -0.1 -0.5 +0.0
carbon source L-Lactate (C) N.D. N.D. +0.2 -0.6 +0.0
carbon source L-Arginine (C) N.D. N.D. +0.1 -0.4 +0.2
survival 4C survival; 1152 hrs N.D. N.D. -0.1 +0.3 -0.2
carbon source Ethanol (C) N.D. N.D. -0.0 +0.6 -0.1
anaerobic Nitrate reduction with yeast extract N.D. N.D. +0.1 +0.5 -0.0
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine N.D. N.D. -0.0 +0.4 +0.2
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine N.D. N.D. +0.1 +0.5 +0.1
motility outer cut, LB soft agar motility assay N.D. N.D. +0.1 +0.5 +0.1
carbon source Ethanol (C) N.D. N.D. +0.1 +0.6 +0.0
resistance 20 mM putrescine N.D. N.D. +0.1 +0.5 +0.3
motility outer cut, LB soft agar motility assay N.D. N.D. +0.2 +0.3 +0.5
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine N.D. N.D. +0.1 +0.6 +0.2
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine N.D. N.D. +0.0 +0.8 +0.3
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine N.D. N.D. +0.0 +0.7 +0.3
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine N.D. N.D. +0.0 +1.1 +0.5
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