Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_07715 and AO356_07720 overlap by 4 nucleotidesAO356_07720 and AO356_07725 are separated by 28 nucleotidesAO356_07725 and AO356_07730 are separated by 21 nucleotidesAO356_07730 and AO356_07735 are separated by 359 nucleotides AO356_07715: AO356_07715 - methionine ABC transporter ATP-binding protein, at 1,713,632 to 1,714,618 _07715 AO356_07720: AO356_07720 - ABC transporter ATP-binding protein, at 1,714,615 to 1,715,586 _07720 AO356_07725: AO356_07725 - diguanylate cyclase, at 1,715,615 to 1,717,129 _07725 AO356_07730: AO356_07730 - hypothetical protein, at 1,717,151 to 1,717,741 _07730 AO356_07735: AO356_07735 - hydroperoxidase, at 1,718,101 to 1,720,365 _07735
Group Condition AO356_07715 AO356_07720 AO356_07725 AO356_07730 AO356_07735
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.2 +0.0 -0.3 -1.3 -0.1
motility outer cut, LB soft agar motility assay +0.1 -0.5 -0.0 -1.3 +0.1
stress nitrite 10 mM -0.4 -0.0 -0.1 -0.6 -0.1
nitrogen source D-Alanine (N) -0.1 -0.0 +0.1 -1.1 -0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.5 +0.0 -0.0 -0.6 -0.0
carbon source L-Proline (C) +0.0 +0.1 +0.1 -0.8 -0.1
lb LB +0.1 -0.3 -0.0 -0.7 +0.2
stress Sisomicin 0.001 mg/ml +0.1 -0.1 +0.0 -0.5 -0.3
carbon source Tween 20 (C) -0.1 -0.0 +0.1 -0.9 +0.1
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.0 -0.0 +0.1 -0.9 +0.3
carbon source L-Lysine (C) -0.3 +0.3 +0.1 -0.4 -0.2
nitrogen source L-Phenylalanine (N) -0.4 -0.2 -0.1 +0.4 +0.1
stress Chlorite 0.08 mM +0.4 -0.1 -0.2 -0.6 +0.1
carbon source Carbon source D-Mannitol 2.5 mM -0.2 -0.3 +0.0 +0.4 -0.3
stress Nickel (II) chloride 0.625 mM -0.2 -0.5 -0.1 +0.2 +0.3
stress syringaldehyde 10 mM -0.3 -0.3 -0.0 +0.3 +0.1
motility outer cut, LB soft agar motility assay -0.4 -0.0 +0.0 +0.4 -0.2
stress Vanillin 2.5 mM -0.3 -0.1 -0.2 +0.3 +0.3
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.3 -0.1 -0.2 +0.5 +0.1
carbon source Carbon source Sucrose 10 mM -0.2 +0.3 +0.0 +0.4 -0.3
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.2 -0.5 -0.2 +0.8 +0.2
carbon source Carbon source Sucrose 5 mM -0.2 +0.1 -0.1 +0.6 -0.1
carbon source L-Malic (C) -0.5 +0.1 +0.1 +0.6 +0.0
carbon source Glycerol (C) -0.3 +0.2 -0.0 +0.5 +0.1
stress Paraquat dichloride 0.0625 mg/ml -0.1 -0.1 -0.0 +0.7 +0.1
stress Tetracycline 0.0001 mg/ml -0.5 +0.2 +0.0 +0.8 +0.2
carbon source L-Arabinose (C) -0.0 -0.2 +0.0 +1.0 +0.1
stress KB-half, Pseudo5 supernatant -0.1 -0.2 -0.0 +1.0 +0.5
anaerobic Nitrate reduction with yeast extract +0.1 +0.0 +0.0 +1.2 +0.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.1 +0.2 +1.5 +0.7
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