Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_07695 and AO356_07700 are separated by 165 nucleotidesAO356_07700 and AO356_07705 are separated by 3 nucleotidesAO356_07705 and AO356_07710 overlap by 4 nucleotidesAO356_07710 and AO356_07715 overlap by 4 nucleotides AO356_07695: AO356_07695 - LuxR family transcriptional regulator, at 1,710,016 to 1,710,777 _07695 AO356_07700: AO356_07700 - proline iminopeptidase, at 1,710,943 to 1,711,830 _07700 AO356_07705: AO356_07705 - ABC transporter permease, at 1,711,834 to 1,712,781 _07705 AO356_07710: AO356_07710 - nickel ABC transporter permease, at 1,712,778 to 1,713,635 _07710 AO356_07715: AO356_07715 - methionine ABC transporter ATP-binding protein, at 1,713,632 to 1,714,618 _07715
Group Condition AO356_07695 AO356_07700 AO356_07705 AO356_07710 AO356_07715
stress acetate 40 mM -0.5 -0.2 -0.1 -0.1 -0.3
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.6 -0.0 -0.2 -0.0 -0.2
stress syringaldehyde 10 mM -0.3 -0.2 -0.2 -0.1 -0.3
stress methylglyoxal 0.016 vol% -0.2 +0.1 -0.2 -0.7 -0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.6 +0.3 -0.8 -0.5 -0.5
survival 4C survival; 360 hrs -0.2 -0.1 -0.2 -0.2 -0.2
stress Vanillin 2.5 mM -0.2 -0.1 -0.1 -0.1 -0.3
stress Aluminum chloride 5 mM +0.1 -0.1 -0.3 -0.1 -0.6
stress Tetracycline 0.0001 mg/ml -0.1 +0.1 +0.0 -0.2 -0.5
motility outer cut, LB soft agar motility assay -0.1 +0.1 -0.5 -0.2 +0.1
stress nitrite 10 mM -0.1 +0.2 -0.3 -0.0 -0.4
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.4 +0.0 +0.0 +0.2 -0.3
stress Paraquat dichloride 0.0625 mg/ml -0.2 -0.2 -0.3 -0.1 +0.2
motility outer cut, LB soft agar motility assay -0.2 +0.3 -0.1 -0.1 -0.4
stress Thallium(I) acetate 0.008 mg/ml -0.1 -0.0 -0.3 -0.2 +0.3
stress Sisomicin 0.001 mg/ml +0.3 -0.4 -0.2 -0.2 +0.1
anaerobic Nitrate reduction with yeast extract -1.0 +0.2 +0.2 +0.3 +0.1
pH Minimal media pH6 +0.2 +0.2 -0.0 -0.2 -0.3
stress Chlorite 0.08 mM +0.1 +0.1 -0.1 -0.5 +0.4
carbon source Carbon source D-Mannitol 2.5 mM +0.2 +0.1 +0.1 -0.3 -0.2
survival 4C survival; 1152 hrs -0.1 +0.2 -0.0 +0.2 -0.3
stress Nalidixic 0.004 mg/ml +0.1 -0.0 -0.3 +0.3 -0.1
stress copper (II) chloride 2.5 mM +0.1 -0.4 +0.1 +0.0 +0.1
carbon source Carbon source Sucrose 10 mM +0.2 -0.2 +0.3 +0.1 -0.2
stress Rifampicin 0.0024 mg/ml +0.1 -0.2 -0.2 +0.2 +0.2
carbon source Carbon source Sucrose 5 mM +0.4 +0.1 +0.0 +0.1 -0.2
motility outer cut, LB soft agar motility assay -0.5 +0.1 +0.2 +0.5 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.2 +0.1 -0.1 +0.2
carbon source D-Ribose (C) -0.1 +0.1 +0.1 +0.3 +0.3
stress Benzalkonium Chloride 0.016 mg/ml +0.1 +0.2 +0.1 +0.4 +0.2
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