Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_07610 and AO356_07615 are separated by 318 nucleotidesAO356_07615 and AO356_07620 are separated by 22 nucleotidesAO356_07620 and AO356_07625 are separated by 209 nucleotidesAO356_07625 and AO356_07630 overlap by 14 nucleotides AO356_07610: AO356_07610 - LysR family transcriptional regulator, at 1,684,926 to 1,685,843 _07610 AO356_07615: AO356_07615 - AraC family transcriptional regulator, at 1,686,162 to 1,687,100 _07615 AO356_07620: AO356_07620 - short-chain dehydrogenase, at 1,687,123 to 1,687,956 _07620 AO356_07625: AO356_07625 - RNA polymerase subunit sigma, at 1,688,166 to 1,688,681 _07625 AO356_07630: AO356_07630 - siderophore-interacting protein, at 1,688,668 to 1,689,651 _07630
Group Condition AO356_07610 AO356_07615 AO356_07620 AO356_07625 AO356_07630
motility outer cut, LB soft agar motility assay +0.0 +0.1 -1.1 +0.4 -0.4
stress nitrite 10 mM -0.3 +0.0 -0.2 -0.5 -0.0
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.2 -0.1 -0.3 -0.4 -0.0
stress Rifampicin 0.0024 mg/ml -0.1 +0.3 -0.1 -0.2 -0.4
nitrogen source nitrite (N) +0.1 +0.1 -0.2 -0.4 -0.0
carbon source Carbon source Sucrose 2.5 mM -0.1 +0.1 -0.5 +0.2 -0.1
anaerobic Nitrate reduction with yeast extract +0.0 +0.1 +0.2 -0.3 -0.3
carbon source m-Inositol (C) -0.2 +0.1 +0.1 -0.4 +0.1
carbon source Carbon source D-Mannitol 5 mM -0.1 +0.2 -0.1 +0.2 -0.3
nitrogen source D-Serine (N) +0.2 +0.0 -0.4 +0.2 -0.1
stress Cephalothin 2 mg/ml +0.2 -0.2 -0.4 +0.2 +0.0
motility outer cut, LB soft agar motility assay +0.3 -0.0 -0.6 +0.4 -0.1
carbon source Cytidine (C) +0.2 +0.2 -0.2 -0.2 -0.1
stress 1-ethyl-3-methylimidazolium lysine 10 mM +0.1 -0.1 +0.3 -0.2 -0.1
carbon source D-Lactate (C) -0.1 +0.1 -0.3 +0.3 -0.1
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.1 +0.1 -0.4 +0.3 -0.1
carbon source Fumarate (C) +0.3 -0.1 -0.2 +0.3 -0.2
carbon source Carbon source D,L-Lactate 10 mM -0.1 +0.1 -0.2 +0.5 +0.0
carbon source Carbon source Sucrose 10 mM -0.1 +0.2 -0.4 +0.6 -0.1
stress methylglyoxal 0.016 vol% -0.0 +0.0 -0.3 +0.5 +0.1
stress Nickel (II) chloride 0.625 mM +0.1 +0.1 -0.3 +0.5 -0.1
stress syringaldehyde 5 mM +0.1 -0.0 -0.3 +0.5 +0.1
motility outer cut, LB soft agar motility assay +0.5 -0.1 +0.2 -0.4 +0.2
stress Cobalt chloride 0.08 mM -0.1 +0.1 -0.0 +0.5 -0.2
carbon source Carbon source Sucrose 2.5 mM -0.2 +0.1 +0.1 +0.5 -0.1
motility outer cut, LB soft agar motility assay -0.0 +0.1 -0.1 +0.6 -0.1
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.3 +0.1 -0.4 +0.5 +0.0
carbon source Carbon source D-Glucose 10 mM +0.1 +0.2 -0.1 +0.8 -0.2
carbon source Carbon source D-Mannitol 2.5 mM +0.0 +0.2 -0.0 +0.8 -0.1
stress copper (II) chloride 2.5 mM +0.1 -0.1 -0.0 +0.8 +0.3
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