Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_07315 and AO356_07320 are separated by 134 nucleotidesAO356_07320 and AO356_07325 are separated by 201 nucleotidesAO356_07325 and AO356_07330 are separated by 14 nucleotidesAO356_07330 and AO356_07335 overlap by 1 nucleotides AO356_07315: AO356_07315 - flavodoxin, at 1,616,226 to 1,618,769 _07315 AO356_07320: AO356_07320 - alkaline phosphatase, at 1,618,904 to 1,620,445 _07320 AO356_07325: AO356_07325 - fructose phosphotransferase system, IIB/IIC components (EC 2.7.1.202) (from data), at 1,620,647 to 1,622,389 _07325 AO356_07330: AO356_07330 - 1-phosphofructokinase (EC 2.7.1.56) (from data), at 1,622,404 to 1,623,345 _07330 AO356_07335: AO356_07335 - fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components (from data), at 1,623,345 to 1,626,209 _07335
Group Condition AO356_07315 AO356_07320 AO356_07325 AO356_07330 AO356_07335
carbon source D-Fructose (C) -0.1 +0.1 -2.8 -3.3 -2.5
carbon source D-Fructose (C) +0.2 -0.1 -2.4 -2.8 -2.6
pH Minimal media pH9 +0.0 +0.1 -1.3 -1.2 -1.6
carbon source D-Mannose (C) +0.0 +0.2 -0.8 -0.6 -0.7
motility outer cut, LB soft agar motility assay +0.1 -0.2 +0.2 -0.7 -0.8
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 -0.3 -0.4 -0.4 -0.1
carbon source L-Histidine (C) +0.1 +0.0 -0.1 -1.0 -0.1
carbon source L-Histidine (C) +0.1 -0.0 -0.2 -0.6 -0.3
stress Nickel (II) chloride 0.625 mM +0.0 -0.0 -0.5 -0.2 -0.3
carbon source D-Glucosamine Hydrochloride (C) -0.1 +0.1 -0.4 -0.1 -0.3
stress Nickel (II) chloride 0.625 mM +0.2 -0.0 -0.2 -0.4 -0.5
carbon source L-Lactate (C) +0.1 -0.1 -0.3 -0.2 -0.3
motility outer cut, LB soft agar motility assay -0.2 -0.3 +0.1 -0.3 -0.1
carbon source D-Xylose (C) -0.0 +0.2 -0.0 -0.4 -0.5
motility outer cut, LB soft agar motility assay -0.4 +0.2 +0.0 -0.3 -0.2
stress Rifampicin 0.0024 mg/ml +0.5 +0.0 -0.4 -0.3 -0.5
carbon source D-Galactose (C) +0.1 +0.0 -0.2 -0.4 -0.3
motility outer cut, LB soft agar motility assay -0.3 -0.1 +0.2 -0.6 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.1 -0.5 -0.2 -0.4 +0.6
stress Benzalkonium Chloride 0.008 mg/ml +0.4 +0.1 -0.3 -0.1 -0.4
stress nitrate 200 mM +0.3 +0.1 -0.2 -0.3 -0.2
stress Benzalkonium Chloride 0.016 mg/ml +0.4 +0.0 -0.3 -0.1 -0.2
stress Sisomicin 0.001 mg/ml -0.1 +0.1 -0.3 -0.3 +0.4
carbon source D-Gluconic Acid (C) +0.2 -0.1 -0.2 +0.5 -0.3
anaerobic Nitrate reduction with yeast extract -0.1 -0.4 +0.2 +0.3 +0.3
carbon source Glycerol (C) +0.1 -0.1 -0.1 +0.6 +0.2
carbon source Glycerol (C) +0.1 +0.0 +0.4 +0.6 +0.1
stress nitrite 10 mM -0.0 +0.3 +0.4 +0.4 +0.2
stress KB-half, Pseudo5 supernatant +0.1 -0.1 -0.0 +0.6 +0.7
carbon source Inosine (C) -0.0 +0.0 +0.2 +1.3 +0.3
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