Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_06930 and AO356_06935 are separated by 147 nucleotidesAO356_06935 and AO356_06940 are separated by 45 nucleotidesAO356_06940 and AO356_06945 are separated by 261 nucleotidesAO356_06945 and AO356_06950 are separated by 126 nucleotides AO356_06930: AO356_06930 - lysine transporter LysE, at 1,533,080 to 1,533,709 _06930 AO356_06935: AO356_06935 - glycerate dehydrogenase, at 1,533,857 to 1,534,822 _06935 AO356_06940: AO356_06940 - 16S rRNA methyltransferase, at 1,534,868 to 1,535,866 _06940 AO356_06945: AO356_06945 - hypothetical protein, at 1,536,128 to 1,536,712 _06945 AO356_06950: AO356_06950 - peptidase M48, at 1,536,839 to 1,537,654 _06950
Group Condition AO356_06930 AO356_06935 AO356_06940 AO356_06945 AO356_06950
stress methylglyoxal 0.016 vol% -0.0 -1.1 -0.4 N.D. -0.1
carbon source D-Fructose (C) -0.3 -0.8 -0.6 N.D. +0.1
carbon source D-Fructose (C) -0.5 -0.8 -0.3 N.D. -0.0
stress Aluminum chloride 5 mM +0.2 -0.7 +0.2 N.D. -1.2
nitrogen source Inosine (N) -0.1 -0.7 -0.4 N.D. -0.2
carbon source Carbon source D,L-Lactate 10 mM -0.3 -0.9 -0.2 N.D. -0.0
carbon source D-Lactate (C) -0.6 -0.5 -0.1 N.D. -0.2
carbon source Carbon source Sucrose 5 mM +0.1 -1.4 -0.0 N.D. -0.1
carbon source Carbon source D,L-Lactate 10 mM +0.0 -1.2 -0.2 N.D. +0.1
carbon source Carbon source Sucrose 2.5 mM -0.3 -1.2 +0.1 N.D. +0.1
carbon source acetate (C) -0.0 -0.8 +0.2 N.D. -0.6
carbon source Carbon source D-Mannitol 2.5 mM +0.2 -1.2 +0.3 N.D. -0.2
carbon source Carbon source Sucrose 10 mM +0.1 -1.1 +0.4 N.D. -0.1
survival 4C survival; 672 hrs -0.2 -0.7 +0.5 N.D. -0.3
motility outer cut, LB soft agar motility assay +0.1 -1.4 +0.8 N.D. -0.2
stress perchlorate 75 mM -0.1 -0.8 +0.4 N.D. -0.1
nitrogen source D-Alanine (N) +0.1 -1.1 +0.4 N.D. +0.0
anaerobic Nitrate reduction with yeast extract -0.2 -1.1 +0.6 N.D. +0.3
carbon source Fumarate (C) -0.3 -0.4 +0.6 N.D. -0.2
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.3 -0.3 +0.8 N.D. -0.2
carbon source L-Histidine (C) -0.2 -0.8 +1.1 N.D. +0.0
stress Sisomicin 0.001 mg/ml -0.2 -0.3 +1.0 N.D. -0.1
stress 1-ethyl-3-methylimidazolium acetate 5 mM +0.0 +0.5 +0.6 N.D. -0.2
motility outer cut, LB soft agar motility assay -0.2 +0.5 +0.4 N.D. +0.3
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.3 +1.3 -0.2 N.D. +0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.0 +0.8 +0.4 N.D. -0.1
stress Lomefloxacin 0.0005 mM +0.2 +0.5 +0.7 N.D. -0.1
nitrogen source D-Serine (N) -0.2 +1.3 +0.5 N.D. -0.2
motility outer cut, LB soft agar motility assay +0.4 +1.0 -0.0 N.D. +0.1
stress D-Cycloserine 0.1 mg/ml +0.1 +1.4 +0.1 N.D. +0.2
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