Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_06910 and AO356_06915 are separated by 269 nucleotidesAO356_06915 and AO356_06920 overlap by 4 nucleotidesAO356_06920 and AO356_06925 overlap by 70 nucleotidesAO356_06925 and AO356_06930 are separated by 46 nucleotides AO356_06910: AO356_06910 - long-chain fatty acid--CoA ligase, at 1,529,431 to 1,531,113 _06910 AO356_06915: AO356_06915 - glycosyl transferase, at 1,531,383 to 1,532,297 _06915 AO356_06920: AO356_06920 - hypothetical protein, at 1,532,294 to 1,532,686 _06920 AO356_06925: AO356_06925 - acetyltransferase, at 1,532,617 to 1,533,033 _06925 AO356_06930: AO356_06930 - lysine transporter LysE, at 1,533,080 to 1,533,709 _06930
Group Condition AO356_06910 AO356_06915 AO356_06920 AO356_06925 AO356_06930
pH Minimal media pH9 -1.2 -0.1 -0.2 N.D. -0.1
carbon source L-Arginine (C) -0.4 -0.2 -0.1 N.D. -0.2
carbon source D-Lactate (C) -0.1 -0.0 -0.1 N.D. -0.6
resistance 20 mM putrescine -0.8 +0.1 +0.2 N.D. -0.3
carbon source D-Alanine (C) -0.7 +0.1 -0.2 N.D. -0.1
carbon source Putrescine (C) -0.9 +0.1 +0.2 N.D. -0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 -0.1 -0.1 -0.3 N.D. -0.3
carbon source L-Asparagine (C) -0.3 -0.0 -0.0 N.D. -0.3
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.4 +0.0 +0.0 N.D. -0.3
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.5 +0.1 -0.1 N.D. -0.1
carbon source D-Lactate (C) -0.4 -0.1 +0.2 N.D. -0.3
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.3 +0.1 -0.0 N.D. -0.3
carbon source Carbon source Sucrose 2.5 mM -0.0 +0.1 -0.3 N.D. -0.3
carbon source D-Fructose (C) -0.1 -0.1 +0.1 N.D. -0.5
carbon source Carbon source D-Mannitol 2.5 mM -0.0 -0.1 -0.6 N.D. +0.2
carbon source L-Histidine (C) -0.3 +0.2 -0.2 N.D. -0.2
pH Minimal media pH8 -0.2 +0.2 -0.1 N.D. -0.3
survival 4C survival; 1152 hrs -0.2 +0.2 +0.2 N.D. -0.4
carbon source D-Gluconic Acid (C) +0.1 -0.2 +0.3 N.D. -0.2
carbon source D-Glucosamine Hydrochloride (C) -0.4 +0.1 +0.2 N.D. +0.1
stress Nalidixic 0.004 mg/ml -0.2 +0.6 +0.0 N.D. -0.3
carbon source L-Lysine (C) -0.3 +0.1 +0.3 N.D. +0.2
stress Nickel (II) chloride 0.625 mM +0.2 +0.1 +0.1 N.D. -0.2
carbon source Carbon source Sucrose 10 mM +0.2 +0.2 -0.4 N.D. +0.3
stress Rifampicin 0.0024 mg/ml -0.0 +0.5 +0.0 N.D. -0.2
stress nitrite 10 mM +0.2 +0.2 -0.2 N.D. +0.3
motility outer cut, LB soft agar motility assay -0.1 +0.0 +0.4 N.D. +0.4
motility outer cut, LB soft agar motility assay +0.1 +0.1 +0.6 N.D. +0.1
stress Lomefloxacin 0.0005 mM +0.1 +0.7 +0.2 N.D. +0.2
stress Doxycycline hyclate 0.0001 mg/ml -0.0 +1.3 +0.2 N.D. -0.2
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