Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_06855 and AO356_06860 are separated by 10 nucleotidesAO356_06860 and AO356_06865 overlap by 1 nucleotidesAO356_06865 and AO356_06870 are separated by 34 nucleotidesAO356_06870 and AO356_06875 are separated by 71 nucleotides AO356_06855: AO356_06855 - peptide ABC transporter ATP-binding protein, at 1,512,684 to 1,513,523 _06855 AO356_06860: AO356_06860 - D-ala-D-ala transporter subunit, at 1,513,534 to 1,514,442 _06860 AO356_06865: AO356_06865 - ABC transporter permease, at 1,514,442 to 1,515,479 _06865 AO356_06870: AO356_06870 - ABC transporter substrate-binding protein, at 1,515,514 to 1,517,136 _06870 AO356_06875: AO356_06875 - mandelate racemase, at 1,517,208 to 1,518,362 _06875
Group Condition AO356_06855 AO356_06860 AO356_06865 AO356_06870 AO356_06875
carbon source L-Lysine (C) -0.2 -0.6 +0.2 -0.1 -0.3
pH Minimal media pH8 -0.6 -0.1 -0.2 +0.1 -0.1
stress methylglyoxal 0.016 vol% -0.3 -0.5 -0.2 -0.0 +0.1
stress copper (II) chloride 2.5 mM +0.1 -0.2 +0.3 -0.5 -0.1
anaerobic Nitrate reduction with yeast extract -0.7 +0.3 -0.1 -0.2 +0.4
motility outer cut, LB soft agar motility assay +0.1 -0.5 +0.5 +0.2 -0.6
carbon source Carbon source Sucrose 2.5 mM +0.2 -0.2 -0.1 -0.4 +0.2
nitrogen source Urea (N) -0.2 +0.2 -0.1 +0.4 -0.3
motility outer cut, LB soft agar motility assay -0.2 -0.4 +0.5 +0.0 +0.0
stress Thallium(I) acetate 0.008 mg/ml +0.1 +0.2 +0.3 -0.1 -0.4
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.3 -0.2 +0.2 +0.2 +0.2
motility outer cut, LB soft agar motility assay +0.3 +0.2 +0.2 -0.2 -0.2
survival 4C survival; 360 hrs +0.5 +0.0 +0.3 -0.2 -0.3
carbon source L-Alanine (C) +0.5 +0.3 -0.3 +0.1 -0.2
stress Nickel (II) chloride 0.625 mM +0.2 +0.1 -0.1 -0.2 +0.4
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.2 +0.1 -0.0 +0.3 +0.4
lb LB -0.2 +0.1 +0.2 +0.2 +0.3
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.4 -0.2 -0.2 +0.4 +0.2
motility outer cut, LB soft agar motility assay +0.1 +0.3 +0.7 -0.2 -0.2
carbon source casaminos (C) +0.2 +0.3 -0.2 +0.2 +0.2
survival 4C survival; 1152 hrs +0.1 -0.1 +0.8 +0.0 -0.0
survival 4C survival; 672 hrs -0.0 +0.2 +0.5 +0.3 +0.1
stress Fusidic 0.1 mg/ml +0.5 +0.1 +0.4 -0.0 +0.0
survival 4C survival; 192 hrs -0.1 +0.3 +0.5 +0.2 +0.1
stress Benzalkonium Chloride 0.016 mg/ml +0.5 -0.0 +0.2 +0.1 +0.2
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.4 +0.2 +0.1 +0.2 +0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.4 +0.2 +0.0 +0.2 +0.3
stress nitrate 200 mM +0.3 +0.2 +0.6 +0.2 +0.2
stress KB-half, Pseudo5 supernatant +0.4 +0.9 +0.6 +0.6 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.6 +1.3 +0.5 +0.5 +0.4
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