Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_06785 and AO356_06790 overlap by 17 nucleotidesAO356_06790 and AO356_06795 are separated by 1 nucleotidesAO356_06795 and AO356_06800 overlap by 1 nucleotidesAO356_06800 and AO356_06805 are separated by 400 nucleotides AO356_06785: AO356_06785 - diguanylate cyclase, at 1,496,621 to 1,497,706 _06785 AO356_06790: AO356_06790 - TonB-dependent receptor, at 1,497,690 to 1,500,041 _06790 AO356_06795: AO356_06795 - histidine kinase, at 1,500,043 to 1,502,430 _06795 AO356_06800: AO356_06800 - AraC family transcriptional regulator, at 1,502,430 to 1,503,230 _06800 AO356_06805: AO356_06805 - hypothetical protein, at 1,503,631 to 1,505,139 _06805
Group Condition AO356_06785 AO356_06790 AO356_06795 AO356_06800 AO356_06805
stress Chlorite 0.08 mM -0.2 -0.2 -0.1 -0.1 -0.5
stress Chlorite 0.04 mM -0.4 -0.1 -0.1 -0.3 -0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.6 +0.1 -0.2 -0.2 +0.1
stress Cisplatin 0.0032 mg/ml -0.2 +0.0 -0.0 -0.4 -0.1
stress Benzalkonium Chloride 0.016 mg/ml -0.3 -0.1 -0.2 -0.2 +0.1
stress Paraquat dichloride 0.0625 mg/ml -0.2 -0.2 -0.0 -0.2 +0.1
stress methylglyoxal 0.016 vol% -0.2 -0.0 +0.2 -0.2 -0.1
stress syringaldehyde 5 mM -0.0 +0.1 -0.0 -0.4 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.2 +0.2 -0.4 +0.1
stress perchlorate 75 mM -0.1 -0.1 -0.0 +0.2 -0.2
carbon source D-Glucose (C) -0.1 -0.0 +0.1 -0.5 +0.2
anaerobic Nitrate reduction with yeast extract -0.3 +0.3 +0.2 -0.3 -0.1
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 +0.2 -0.2 -0.3 +0.2
stress copper (II) chloride 2.5 mM +0.1 +0.1 -0.1 -0.3 +0.2
stress Ceftazidime 0.2 mg/ml -0.1 +0.2 +0.2 -0.1 -0.1
stress Benzethonium chloride 0.025 mM -0.2 +0.1 +0.1 +0.2 -0.2
motility outer cut, LB soft agar motility assay -0.0 -0.1 +0.0 +0.4 -0.1
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.0 -0.0 -0.0 +0.4 -0.1
nitrogen source Urea (N) -0.1 -0.1 +0.2 +0.3 -0.0
survival 4C survival; 192 hrs +0.3 +0.1 -0.0 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.3 -0.1 +0.2 -0.2 +0.1
carbon source L-Leucine (C) +0.1 +0.0 +0.2 +0.2 -0.2
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.1 -0.0 +0.0 +0.5 -0.0
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.0 -0.1 +0.0 +0.5 +0.0
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine +0.0 +0.0 +0.0 +0.5 -0.1
pH Minimal media pH8 +0.1 -0.0 +0.1 +0.5 -0.1
survival 4C survival; 1152 hrs +0.1 +0.2 -0.1 +0.2 +0.2
temperature LB 30C +0.1 +0.1 +0.1 +0.1 +0.2
stress KB-half, Pseudo5 supernatant -0.1 +0.9 +0.4 +0.1 -0.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +1.0 +0.5 -0.2 +0.1
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