Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_06245 and AO356_06250 are separated by 48 nucleotidesAO356_06250 and AO356_06255 overlap by 4 nucleotidesAO356_06255 and AO356_06260 overlap by 4 nucleotidesAO356_06260 and AO356_06265 overlap by 4 nucleotides AO356_06245: AO356_06245 - diguanylate cyclase, at 1,383,349 to 1,384,350 _06245 AO356_06250: AO356_06250 - chemotaxis protein CheY, at 1,384,399 to 1,385,409 _06250 AO356_06255: AO356_06255 - chemotaxis protein CheA, at 1,385,406 to 1,387,670 _06255 AO356_06260: AO356_06260 - chemotaxis protein CheW, at 1,387,667 to 1,388,335 _06260 AO356_06265: AO356_06265 - chemotaxis protein CheR, at 1,388,332 to 1,389,597 _06265
Group Condition AO356_06245 AO356_06250 AO356_06255 AO356_06260 AO356_06265
motility outer cut, LB soft agar motility assay +0.0 -1.3 +0.1 -0.9 +0.4
nitrogen source Gly-Glu (N) +0.0 -0.9 +0.1 -0.2 -0.3
stress nitrate 200 mM +0.0 -1.2 -0.0 -0.2 +0.1
survival 4C survival; 360 hrs -0.1 -1.0 +0.0 +0.1 -0.1
carbon source Cytidine (C) +0.2 -1.3 +0.2 +0.0 -0.0
stress Choline chloride 300 mM +0.3 -0.7 -0.0 -0.4 -0.0
carbon source acetate (C) +0.0 -1.1 +0.1 -0.1 +0.1
survival 4C survival; 192 hrs -0.1 -0.9 -0.1 -0.1 +0.3
stress Chlorite 0.04 mM -0.1 -1.1 +0.1 +0.2 -0.0
stress Tetracycline 0.0001 mg/ml +0.0 -1.1 +0.1 +0.2 +0.0
motility outer cut, LB soft agar motility assay -0.0 -0.8 -0.2 +0.3 +0.1
stress perchlorate 75 mM +0.0 -0.8 -0.2 -0.1 +0.4
survival 4C survival; 672 hrs +0.0 -1.0 +0.1 +0.2 +0.1
nitrogen source Urea (N) +0.1 -0.9 +0.1 +0.0 +0.2
stress Cephalothin 2 mg/ml +0.2 -0.8 -0.1 +0.3 -0.1
motility outer cut, LB soft agar motility assay +0.2 -1.1 +0.2 -0.2 +0.5
carbon source L-Leucine (C) +0.3 -0.7 -0.0 +0.2 -0.2
temperature LB 30C +0.1 -0.7 -0.2 +0.1 +0.3
stress Chlorite 0.08 mM +0.2 -0.9 -0.1 +0.1 +0.4
carbon source L-Alanine (C) -0.0 -0.7 +0.1 +0.3 +0.2
carbon source L-Lysine (C) +0.1 +0.5 -0.1 +0.0 -0.6
carbon source L-Lactate (C) +0.3 -1.1 +0.1 +0.2 +0.4
carbon source D-Gluconic Acid (C) +0.1 -0.7 +0.2 +0.1 +0.2
survival 4C survival; 1152 hrs +0.1 -0.7 +0.4 -0.0 +0.3
stress Cholin acetate 40 mM -0.2 +0.9 -0.3 -0.0 -0.2
stress Sisomicin 0.001 mg/ml -0.2 +0.8 +0.2 -0.3 +0.0
carbon source D-Mannose (C) +0.3 -0.3 +0.2 +0.5 +0.1
anaerobic Nitrate reduction with yeast extract +0.2 +1.1 +0.0 -0.1 -0.5
stress KB-half, Pseudo5 supernatant +0.1 -0.4 +0.3 +0.5 +0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.2 +1.7 +0.0 +0.2 -0.2
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