Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_06215 and AO356_06220 are separated by 148 nucleotidesAO356_06220 and AO356_06225 are separated by 36 nucleotidesAO356_06225 and AO356_06230 are separated by 151 nucleotidesAO356_06230 and AO356_06235 are separated by 101 nucleotides AO356_06215: AO356_06215 - alpha/beta hydrolase, at 1,376,492 to 1,377,397 _06215 AO356_06220: AO356_06220 - hypothetical protein, at 1,377,546 to 1,378,823 _06220 AO356_06225: AO356_06225 - hypothetical protein, at 1,378,860 to 1,379,414 _06225 AO356_06230: AO356_06230 - TetR family transcriptional regulator, at 1,379,566 to 1,380,282 _06230 AO356_06235: AO356_06235 - lysine--tRNA ligase, at 1,380,384 to 1,381,886 _06235
Group Condition AO356_06215 AO356_06220 AO356_06225 AO356_06230 AO356_06235
carbon source L-Lysine (C) -0.2 -0.1 -0.3 -0.6 N.D.
carbon source L-Lysine (C) -0.2 -0.0 -0.2 -0.5 N.D.
survival 4C survival; 1152 hrs +0.1 +0.1 -0.4 -0.7 N.D.
pH Minimal media pH6 -0.3 -0.1 -0.4 -0.0 N.D.
carbon source Ethanol (C) -0.1 -0.2 -0.5 +0.1 N.D.
stress Ceftazidime 0.2 mg/ml +0.1 +0.1 -0.5 -0.3 N.D.
stress Lomefloxacin 0.0005 mM +0.2 -0.0 -0.6 -0.2 N.D.
carbon source L-Histidine (C) -0.4 -0.0 +0.2 -0.3 N.D.
stress perchlorate 75 mM -0.2 +0.0 +0.1 -0.4 N.D.
stress 1-ethyl-3-methylimidazolium chloride 200 mM +0.1 +0.2 -0.7 -0.1 N.D.
stress Paraquat dichloride 0.0625 mg/ml +0.4 -0.2 -0.2 -0.3 N.D.
stress copper (II) chloride 2.5 mM +0.2 +0.2 +0.2 -0.9 N.D.
anaerobic Nitrate reduction with yeast extract -0.4 +0.3 +0.2 -0.3 N.D.
carbon source L-Arabinose (C) -0.4 -0.0 +0.2 +0.2 N.D.
stress nitrite 10 mM -0.2 -0.2 +0.1 +0.3 N.D.
motility outer cut, LB soft agar motility assay +0.4 -0.0 -0.3 -0.1 N.D.
carbon source Carbon source D-Mannitol 10 mM +0.3 +0.1 -0.4 +0.1 N.D.
stress methylglyoxal 0.016 vol% -0.3 +0.3 +0.2 -0.1 N.D.
nitrogen source L-tyrosine (N) -0.4 +0.1 +0.3 +0.1 N.D.
carbon source acetate (C) -0.2 -0.1 +0.2 +0.3 N.D.
carbon source Carbon source D,L-Lactate 10 mM +0.3 -0.1 -0.3 +0.3 N.D.
stress Vanillin 2.5 mM -0.4 +0.1 +0.4 +0.1 N.D.
lb LB +0.2 +0.2 -0.3 +0.2 N.D.
stress Sisomicin 0.001 mg/ml +0.3 +0.1 -0.4 +0.3 N.D.
carbon source D-Lactate (C) +0.1 -0.1 +0.5 +0.2 N.D.
carbon source a-Ketoglutaric (C) +0.3 -0.1 +0.3 +0.3 N.D.
carbon source D-Ribose (C) +0.2 +0.1 +0.4 +0.2 N.D.
motility outer cut, LB soft agar motility assay +0.4 -0.2 +0.3 +0.4 N.D.
stress Nickel (II) chloride 0.625 mM +0.0 +0.2 +0.4 +0.4 N.D.
nitrogen source Gly-Glu (N) -0.3 +0.2 +0.4 +1.4 N.D.
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