Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_06140 and AO356_06145 are separated by 125 nucleotidesAO356_06145 and AO356_06150 are separated by 91 nucleotidesAO356_06150 and AO356_06155 are separated by 1 nucleotidesAO356_06155 and AO356_06160 are separated by 16 nucleotides AO356_06140: AO356_06140 - TetR family transcriptional regulator, at 1,362,977 to 1,363,612 _06140 AO356_06145: AO356_06145 - SAM-dependent methyltransferase, at 1,363,738 to 1,364,520 _06145 AO356_06150: AO356_06150 - energy transducer TonB, at 1,364,612 to 1,365,232 _06150 AO356_06155: AO356_06155 - extensin, at 1,365,234 to 1,365,932 _06155 AO356_06160: AO356_06160 - 2-methylisocitrate lyase, at 1,365,949 to 1,366,770 _06160
Group Condition AO356_06140 AO356_06145 AO356_06150 AO356_06155 AO356_06160
carbon source L-Glutamic (C) -0.0 -0.5 -1.2 -0.1 -0.3
stress Nickel (II) chloride 0.625 mM -0.2 -1.0 +0.1 -0.2 -0.3
nitrogen source D-Serine (N) -0.7 +0.2 -0.2 -0.5 -0.0
stress copper (II) chloride 2.5 mM -0.3 -0.7 -0.2 +0.2 -0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.6 -0.5 -0.1 +0.3 -0.1
survival 4C survival; 672 hrs +0.2 -0.3 -1.4 +0.3 +0.2
stress nitrite 10 mM -0.6 -0.5 -0.3 +0.3 +0.2
survival 4C survival; 1152 hrs -0.0 -0.6 -0.7 +0.3 +0.1
carbon source NAG (C) +0.1 -0.5 -0.6 +0.1 +0.2
temperature LB 30C +0.4 -0.8 -0.1 -0.2 -0.1
carbon source L-Lysine (C) -0.4 -0.1 -0.4 +0.4 -0.2
stress Cisplatin 0.0032 mg/ml +0.3 -0.9 -0.0 +0.1 -0.2
carbon source L-Leucine (C) -0.5 +0.4 +0.1 -0.6 -0.0
stress Chlorite 0.08 mM -0.4 -0.2 +0.6 -0.2 -0.3
stress Doxycycline hyclate 0.0001 mg/ml -0.3 -0.5 +0.6 -0.1 -0.2
carbon source Putrescine (C) -0.2 +0.5 -0.5 -0.3 +0.1
motility outer cut, LB soft agar motility assay -0.1 -1.0 +0.4 +0.2 +0.0
anaerobic Nitrate reduction with yeast extract +0.6 -2.3 +0.4 +0.7 +0.5
motility outer cut, LB soft agar motility assay -0.1 -0.5 +0.7 +0.1 -0.4
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.2 +0.5 -0.7 +0.2 +0.1
stress Sisomicin 0.001 mg/ml -0.2 +0.6 +0.5 -0.4 -0.3
motility outer cut, LB soft agar motility assay +0.1 +0.3 +0.2 +0.5 -0.7
carbon source Ethanol (C) -0.3 +0.8 -0.1 +0.2 -0.2
pH Minimal media pH7 +0.5 -0.3 +0.2 +0.3 +0.0
stress Ceftazidime 0.2 mg/ml -0.1 +0.3 -0.0 +0.9 -0.2
carbon source Ethanol (C) -0.2 +1.1 +0.2 +0.1 -0.1
pH Minimal media pH6 +0.6 -0.1 +0.5 +0.2 -0.0
pH Minimal media pH8 +0.9 +0.3 +0.0 +0.1 -0.1
pH Minimal media pH8 +0.8 +0.4 +0.2 +0.1 -0.1
stress Benzalkonium Chloride 0.016 mg/ml +0.8 +0.2 +0.5 +0.4 +0.1
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