Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_05670 and AO356_05675 are separated by 83 nucleotidesAO356_05675 and AO356_05680 are separated by 71 nucleotidesAO356_05680 and AO356_05685 overlap by 19 nucleotidesAO356_05685 and AO356_05690 are separated by 24 nucleotides AO356_05670: AO356_05670 - recombinase RecA, at 1,267,182 to 1,268,234 _05670 AO356_05675: AO356_05675 - damage-inducible protein CinA, at 1,268,318 to 1,268,818 _05675 AO356_05680: AO356_05680 - lysozyme, at 1,268,890 to 1,269,426 _05680 AO356_05685: AO356_05685 - lysozyme, at 1,269,408 to 1,269,971 _05685 AO356_05690: AO356_05690 - hypothetical protein, at 1,269,996 to 1,270,427 _05690
Group Condition AO356_05670 AO356_05675 AO356_05680 AO356_05685 AO356_05690
motility outer cut, LB soft agar motility assay -3.1 -0.2 -0.5 +0.1 -0.6
stress nitrite 10 mM -3.2 -0.5 -0.1 +0.1 -0.1
motility outer cut, LB soft agar motility assay -3.0 -0.3 -0.2 -0.1 -0.2
lb LB -3.6 -0.2 -0.1 -0.1 +0.2
stress Cholin acetate 40 mM -3.5 -0.2 -0.0 -0.3 +0.3
stress Spectinomycin 0.0125 mg/ml -3.2 -0.3 -0.1 +0.0 -0.1
stress methylglyoxal 0.016 vol% -3.8 -0.0 +0.1 +0.2 +0.0
stress D-Cycloserine 0.1 mg/ml -3.7 -0.1 +0.0 +0.1 +0.1
stress Rifampicin 0.0016 mg/ml -2.5 -0.4 -0.5 -0.2 -0.0
stress Spectinomycin 0.025 mg/ml -3.2 -0.2 -0.0 +0.0 -0.1
stress Doxycycline hyclate 0.0001 mg/ml -3.4 -0.1 -0.1 +0.0 +0.1
stress Benzalkonium Chloride 0.008 mg/ml -3.2 +0.0 -0.1 +0.2 -0.3
stress perchlorate 75 mM -2.9 +0.0 -0.3 -0.2 -0.0
carbon source L-Lysine (C) -3.1 +0.0 -0.2 -0.2 +0.1
carbon source Carnitine Hydrochloride (C) -2.9 -0.3 -0.0 -0.2 +0.2
lb LB -2.8 -0.1 -0.1 -0.1 -0.1
stress Nalidixic 0.004 mg/ml -3.5 -0.1 +0.2 -0.0 +0.1
stress Chlorite 0.04 mM -2.8 -0.0 -0.1 -0.1 -0.2
stress Chlorite 0.08 mM -2.8 +0.2 -0.5 -0.1 +0.1
carbon source m-Inositol (C) -3.1 +0.2 -0.0 -0.2 +0.1
stress Aluminum chloride 5 mM -3.4 -0.1 +0.4 +0.1 +0.1
carbon source Carbon source D-Mannitol 2.5 mM -2.3 -0.3 -0.4 +0.0 +0.2
stress Cisplatin 0.0032 mg/ml -3.1 +0.1 +0.3 +0.1 -0.1
stress acetate 40 mM -3.0 +0.1 +0.2 +0.0 +0.2
stress copper (II) chloride 2.5 mM -2.2 +0.1 -0.8 +0.1 +0.4
carbon source Carbon source Sucrose 10 mM -3.1 -0.1 +0.4 +0.2 +0.3
carbon source Carbon source D-Glucose 10 mM -2.7 -0.1 +0.1 +0.2 +0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM -2.8 +0.1 +0.2 +0.2 -0.0
stress Lomefloxacin 0.0005 mM -2.4 -0.3 -0.2 +0.4 +0.7
motility outer cut, LB soft agar motility assay -2.6 +0.8 +0.4 +0.5 -0.3
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