Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_05360 and AO356_05365 are separated by 122 nucleotidesAO356_05365 and AO356_05370 are separated by 104 nucleotidesAO356_05370 and AO356_05375 are separated by 61 nucleotidesAO356_05375 and AO356_05380 are separated by 73 nucleotides AO356_05360: AO356_05360 - hypothetical protein, at 1,205,522 to 1,206,001 _05360 AO356_05365: AO356_05365 - LysR family transcriptional regulator, at 1,206,124 to 1,207,038 _05365 AO356_05370: AO356_05370 - short-chain dehydrogenase, at 1,207,143 to 1,207,742 _05370 AO356_05375: AO356_05375 - hypothetical protein, at 1,207,804 to 1,208,478 _05375 AO356_05380: AO356_05380 - hypothetical protein, at 1,208,552 to 1,210,165 _05380
Group Condition AO356_05360 AO356_05365 AO356_05370 AO356_05375 AO356_05380
anaerobic Nitrate reduction with yeast extract -0.4 -0.6 -1.9 +0.3 +0.1
stress perchlorate 75 mM -0.8 +0.0 +0.1 -0.7 -0.2
stress Benzalkonium Chloride 0.008 mg/ml -0.3 +0.1 -0.6 -0.2 -0.1
stress Spectinomycin 0.0125 mg/ml -0.5 +0.0 -0.5 -0.1 -0.0
stress Lomefloxacin 0.0005 mM -0.6 -0.0 +0.3 -0.7 +0.1
stress Sisomicin 0.001 mg/ml -0.3 -0.1 -0.7 +0.3 -0.1
nitrogen source Gly-Glu (N) -0.2 +0.2 -0.6 -0.1 -0.1
stress Cisplatin 0.0032 mg/ml -0.5 -0.2 -0.1 -0.1 +0.2
survival 4C survival; 672 hrs -0.5 -0.2 +0.2 +0.1 -0.2
carbon source D,L-Lactate (C) -0.3 -0.4 +0.3 -0.1 -0.0
stress Nalidixic 0.004 mg/ml -0.2 -0.1 -0.4 +0.4 -0.1
stress Chloramphenicol 0.005 mg/ml -0.4 +0.1 +0.3 +0.2 -0.5
resistance 10% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.2 -0.0 -0.5 +0.4 +0.1
stress Cisplatin 0.0032 mg/ml -0.1 -0.2 +0.3 -0.3 +0.2
stress nitrate 200 mM -0.6 -0.1 +0.6 -0.0 -0.0
stress Doxycycline hyclate 0.0001 mg/ml -0.6 +0.0 +0.2 +0.1 +0.1
motility outer cut, LB soft agar motility assay +0.1 +0.2 -0.4 -0.3 +0.3
nitrogen source D-Serine (N) -0.2 +0.2 -0.4 -0.0 +0.5
motility outer cut, LB soft agar motility assay -0.6 +0.3 +0.6 -0.3 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.2 +0.1 -0.6 +0.3 +0.2
carbon source Carbon source D-Glucose 10 mM +0.5 -0.2 -0.1 -0.1 +0.2
carbon source Carbon source D-Mannitol 5 mM +0.3 -0.2 -0.2 +0.2 +0.1
motility outer cut, LB soft agar motility assay +0.3 +0.2 -0.0 -0.5 +0.4
stress Bacitracin 2 mg/ml -0.2 -0.1 +0.3 +0.4 +0.1
stress Benzalkonium Chloride 0.016 mg/ml -0.1 +0.3 -0.2 +0.4 +0.2
stress Cholin acetate 40 mM +0.3 +0.3 +0.1 -0.3 +0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.4 +0.1 +0.4 -0.3 +0.0
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.3 -0.1 +0.2 +0.3 +0.1
carbon source Carbon source D-Mannitol 10 mM +0.4 -0.1 +0.3 +0.2 +0.1
carbon source Carbon source Sucrose 2.5 mM +0.6 -0.2 +0.2 +0.2 +0.1
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