Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_05045 and AO356_05050 are separated by 208 nucleotidesAO356_05050 and AO356_05055 are separated by 150 nucleotidesAO356_05055 and AO356_05060 are separated by 92 nucleotidesAO356_05060 and AO356_05065 are separated by 216 nucleotides AO356_05045: AO356_05045 - lysine transporter LysE, at 1,134,845 to 1,135,507 _05045 AO356_05050: AO356_05050 - glutamate-pyruvate aminotransferase, at 1,135,716 to 1,136,933 _05050 AO356_05055: AO356_05055 - permease DsdX, at 1,137,084 to 1,138,436 _05055 AO356_05060: AO356_05060 - gluconokinase, at 1,138,529 to 1,139,062 _05060 AO356_05065: AO356_05065 - LacI family transcriptional regulator, at 1,139,279 to 1,140,310 _05065
Group Condition AO356_05045 AO356_05050 AO356_05055 AO356_05060 AO356_05065
nitrogen source D-Serine (N) +0.4 -0.3 -4.3 -4.9 +0.9
pH Minimal media pH8 -0.2 +0.1 -3.6 -3.5 +0.2
pH Minimal media pH7 -0.2 +0.1 -2.9 -2.7 -0.1
carbon source Carbon source D-Glucose 10 mM -0.0 +0.1 -1.6 -3.2 -0.1
pH Minimal media pH6 -0.2 +0.2 -2.3 -2.8 +0.3
nitrogen source nitrite (N) -0.0 +0.1 -2.5 -2.3 +0.0
pH Minimal media pH6 -0.1 -0.1 -2.4 -1.7 +0.2
pH Minimal media pH7 +0.0 +0.1 -2.1 -1.9 -0.1
carbon source Carbon source D-Glucose 10 mM -0.1 -0.0 -2.0 -1.6 -0.1
pH Minimal media pH8 -0.0 +0.1 -2.0 -2.0 +0.3
carbon source D-Glucose (C) +0.3 +0.1 -2.1 -1.4 -0.0
carbon source L-Histidine (C) -0.1 -0.0 +0.1 -0.3 -2.7
nitrogen source Urea (N) +0.2 +0.0 -1.3 -1.9 +0.1
nitrogen source L-Isoleucine (N) +0.2 +0.1 -2.0 -1.9 +0.7
carbon source D-Glucose (C) -0.0 -0.2 -2.0 -0.5 -0.0
carbon source L-Histidine (C) +0.2 -0.1 +0.2 -0.4 -2.2
nitrogen source Ammonium chloride (N) +0.2 +0.2 -1.4 -1.1 -0.2
motility outer cut, LB soft agar motility assay -0.1 +0.2 -1.2 -1.0 -0.1
carbon source L-Lysine (C) +0.0 +0.2 +0.0 -1.2 -1.0
nitrogen source D-Alanine (N) +0.1 -0.0 -0.8 -1.1 +0.1
nitrogen source Adenine (N) -0.0 +0.1 -1.1 -0.7 -0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.1 -0.0 -0.7 -0.9 +0.0
nitrogen source L-Leucine (N) +0.2 +0.1 -0.7 -1.0 +0.2
carbon source L-Lysine (C) -0.1 +0.2 +0.4 -0.6 -1.0
motility outer cut, LB soft agar motility assay +0.2 -0.6 +0.4 -0.7 -0.0
stress KB-half, Pseudo5 supernatant +0.2 -0.0 -0.4 -0.9 +0.4
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.2 -0.5 -0.2 +0.4 -0.6
carbon source D-Gluconic Acid (C) +0.1 +0.3 +0.4 +0.8 -0.5
carbon source Carbon source Sucrose 10 mM +0.3 +0.1 +0.7 +0.7 -0.1
carbon source D-Glucosamine Hydrochloride (C) +0.1 +0.1 -1.0 +1.4 +4.4
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