Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_04605 and AO356_04610 overlap by 8 nucleotidesAO356_04610 and AO356_04615 are separated by 457 nucleotidesAO356_04615 and AO356_04620 are separated by 55 nucleotidesAO356_04620 and AO356_04625 are separated by 1 nucleotides AO356_04605: AO356_04605 - histidine kinase, at 1,036,613 to 1,038,004 _04605 AO356_04610: AO356_04610 - transcriptional regulator, at 1,037,997 to 1,038,668 _04610 AO356_04615: AO356_04615 - tricarboxylic transporter, at 1,039,126 to 1,040,118 _04615 AO356_04620: AO356_04620 - hypothetical protein, at 1,040,174 to 1,040,635 _04620 AO356_04625: AO356_04625 - tripartite tricarboxylate transporter TctA, at 1,040,637 to 1,042,151 _04625
Group Condition AO356_04605 AO356_04610 AO356_04615 AO356_04620 AO356_04625
carbon source L-Lysine (C) -1.7 -0.2 -0.2 -0.3 -0.2
carbon source L-Histidine (C) -1.6 -0.2 -0.2 -0.3 -0.0
carbon source L-Histidine (C) -1.5 -0.1 -0.1 -0.2 -0.1
carbon source L-Lysine (C) -1.4 -0.0 -0.0 -0.5 -0.0
stress perchlorate 75 mM -0.3 -0.4 -0.1 -0.4 -0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.2 -0.2 -0.2 -0.3 -0.0
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.2 +0.0 -0.2 -0.3 -0.1
carbon source D-Trehalose (C) -0.3 -0.4 -0.1 +0.1 -0.1
motility outer cut, LB soft agar motility assay -0.7 -0.3 -0.1 +0.2 +0.1
stress Chlorite 0.08 mM -0.0 -0.3 -0.3 -0.2 +0.1
carbon source D-Xylose (C) -0.1 +0.1 -0.1 -0.2 -0.3
stress syringaldehyde 5 mM -0.2 -0.5 +0.1 +0.1 -0.1
carbon source Carbon source D-Mannitol 2.5 mM +0.0 -0.3 +0.0 -0.2 -0.2
carbon source L-Lactate (C) +0.1 -0.2 -0.1 -0.1 -0.2
anaerobic Nitrate reduction with yeast extract +0.1 +0.4 -0.4 -0.3 -0.4
carbon source pyruvate (C) +0.2 -0.4 -0.2 +0.0 -0.2
carbon source D-Trehalose (C) -0.4 +0.2 -0.1 -0.2 -0.0
stress Doxycycline hyclate 0.0001 mg/ml -0.3 -0.3 -0.1 +0.2 +0.2
carbon source D-Gluconic Acid (C) +0.1 -0.2 -0.2 -0.2 +0.3
carbon source Carbon source D-Mannitol 2.5 mM +0.2 -0.4 +0.1 +0.1 -0.1
stress 1-ethyl-3-methylimidazolium acetate 10 mM -0.3 -0.1 +0.0 +0.2 +0.2
carbon source D-Lactate (C) -0.1 -0.2 -0.1 +0.1 +0.3
stress KB-half, Pseudo5 supernatant +0.3 -0.4 -0.1 -0.1 +0.4
carbon source Fumarate (C) -0.0 -0.2 -0.1 +0.4 +0.2
carbon source Carbon source D-Glucose 10 mM +0.3 -0.1 +0.1 +0.2 -0.1
motility outer cut, LB soft agar motility assay -0.3 +0.0 +0.3 +0.2 +0.1
carbon source Fumarate (C) +0.1 +0.2 -0.1 +0.3 +0.2
carbon source acetate (C) +0.2 -0.0 -0.2 +0.6 +0.3
carbon source Ethanol (C) +0.6 +0.1 +0.2 +0.0 +0.2
carbon source Ethanol (C) +0.5 -0.1 +0.3 +0.2 +0.2
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