Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_04590 and AO356_04595 are separated by 149 nucleotidesAO356_04595 and AO356_04600 are separated by 35 nucleotidesAO356_04600 and AO356_04605 are separated by 167 nucleotidesAO356_04605 and AO356_04610 overlap by 8 nucleotides AO356_04590: AO356_04590 - hypothetical protein, at 1,034,243 to 1,034,497 _04590 AO356_04595: AO356_04595 - aminomethyltransferase, at 1,034,647 to 1,035,588 _04595 AO356_04600: AO356_04600 - histidine kinase, at 1,035,624 to 1,036,445 _04600 AO356_04605: AO356_04605 - histidine kinase, at 1,036,613 to 1,038,004 _04605 AO356_04610: AO356_04610 - transcriptional regulator, at 1,037,997 to 1,038,668 _04610
Group Condition AO356_04590 AO356_04595 AO356_04600 AO356_04605 AO356_04610
motility outer cut, LB soft agar motility assay N.D. N.D. -2.3 -0.7 -0.3
motility outer cut, LB soft agar motility assay N.D. N.D. -1.8 -0.3 +0.0
motility outer cut, LB soft agar motility assay N.D. N.D. -1.7 -0.1 -0.1
carbon source L-Lysine (C) N.D. N.D. -0.0 -1.7 -0.2
motility outer cut, LB soft agar motility assay N.D. N.D. -1.7 -0.1 -0.1
carbon source L-Histidine (C) N.D. N.D. +0.3 -1.6 -0.2
carbon source L-Histidine (C) N.D. N.D. +0.2 -1.5 -0.1
carbon source L-Lysine (C) N.D. N.D. +0.1 -1.4 -0.0
nitrogen source Inosine (N) N.D. N.D. -0.7 -0.1 -0.0
stress perchlorate 75 mM N.D. N.D. -0.1 -0.3 -0.4
stress Doxycycline hyclate 0.0001 mg/ml N.D. N.D. -0.2 -0.3 -0.3
nitrogen source Urea (N) N.D. N.D. -0.5 -0.3 +0.0
stress Thallium(I) acetate 0.008 mg/ml N.D. N.D. -0.1 -0.3 -0.3
stress syringaldehyde 5 mM N.D. N.D. +0.0 -0.2 -0.5
carbon source D-Trehalose (C) N.D. N.D. +0.1 -0.3 -0.4
nitrogen source D-Glucosamine Hydrochloride (N) N.D. N.D. -0.8 +0.1 +0.1
nitrogen source L-Phenylalanine (N) N.D. N.D. -0.4 -0.1 +0.1
nitrogen source Cytosine (N) N.D. N.D. -0.5 +0.0 +0.2
stress Cholin acetate 40 mM N.D. N.D. +0.3 -0.2 -0.2
stress KB-half, Pseudo5 supernatant N.D. N.D. -0.1 +0.3 -0.4
carbon source D-Trehalose (C) N.D. N.D. +0.1 -0.4 +0.2
stress 1-ethyl-3-methylimidazolium acetate 10 mM N.D. N.D. +0.4 -0.3 -0.1
carbon source Carbon source D-Mannitol 2.5 mM N.D. N.D. +0.1 +0.2 -0.4
stress 1-ethyl-3-methylimidazolium acetate 5 mM N.D. N.D. +0.3 +0.1 -0.4
carbon source L-Isoleucine (C) N.D. N.D. -0.3 +0.1 +0.3
carbon source Uridine (C) N.D. N.D. -0.2 -0.0 +0.4
pH Minimal media pH6 N.D. N.D. +0.4 -0.1 +0.2
stress Cholin acetate 20 mM N.D. N.D. +0.4 +0.2 -0.1
carbon source Ethanol (C) N.D. N.D. +0.2 +0.5 -0.1
carbon source Ethanol (C) N.D. N.D. +0.2 +0.6 +0.1
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