Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_04515 and AO356_04520 are separated by 27 nucleotidesAO356_04520 and AO356_04525 are separated by 4 nucleotidesAO356_04525 and AO356_04530 are separated by 17 nucleotidesAO356_04530 and AO356_04535 are separated by 315 nucleotides AO356_04515: AO356_04515 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 1,019,894 to 1,020,607 _04515 AO356_04520: AO356_04520 - MBL fold metallo-hydrolase, at 1,020,635 to 1,021,393 _04520 AO356_04525: AO356_04525 - hypothetical protein, at 1,021,398 to 1,022,513 _04525 AO356_04530: AO356_04530 - 4-hydroxy-tetrahydrodipicolinate synthase, at 1,022,531 to 1,023,409 _04530 AO356_04535: AO356_04535 - glycine cleavage system protein R, at 1,023,725 to 1,024,285 _04535
Group Condition AO356_04515 AO356_04520 AO356_04525 AO356_04530 AO356_04535
pH Minimal media pH9 N.D. -0.2 -3.1 N.D. -0.5
stress perchlorate 75 mM N.D. -0.1 -1.9 N.D. -0.7
carbon source Putrescine (C) N.D. -0.0 -1.2 N.D. -0.7
nitrogen source Uridine (N) N.D. -0.1 -0.5 N.D. -1.3
carbon source D-Alanine (C) N.D. -0.3 -0.9 N.D. -0.6
stress copper (II) chloride 2.5 mM N.D. -0.2 -0.8 N.D. -0.6
survival 4C survival; 1152 hrs N.D. -0.2 -1.1 N.D. -0.3
carbon source Carbon source D-Mannitol 2.5 mM N.D. -0.2 -0.7 N.D. -0.7
survival 4C survival; 360 hrs N.D. -0.1 -1.4 N.D. -0.1
carbon source m-Inositol (C) N.D. -0.2 -0.9 N.D. -0.4
stress Rifampicin 0.0016 mg/ml N.D. -0.1 -0.8 N.D. -0.5
phage P5ss-5 phage 10-1 dilution SM calcl2 N.D. +0.0 -1.2 N.D. -0.2
carbon source Ethanol (C) N.D. -0.1 -0.9 N.D. -0.4
stress Lomefloxacin 0.0005 mM N.D. -0.2 -0.8 N.D. -0.4
carbon source Carbon source Sucrose 5 mM N.D. -0.2 -1.1 N.D. -0.0
stress 1-ethyl-3-methylimidazolium lysine 10 mM N.D. -0.3 -1.4 N.D. +0.4
survival 4C survival; 192 hrs N.D. +0.0 -1.4 N.D. +0.1
stress Spectinomycin 0.025 mg/ml N.D. -0.2 -0.6 N.D. -0.5
carbon source L-Leucine (C) N.D. -0.1 -0.7 N.D. -0.5
stress Rifampicin 0.0024 mg/ml N.D. +0.1 -0.6 N.D. -0.8
carbon source D-Sorbitol (C) N.D. -0.1 -0.8 N.D. -0.3
stress Benzalkonium Chloride 0.016 mg/ml N.D. +0.0 +0.5 N.D. -1.8
anaerobic Nitrate reduction with yeast extract N.D. -0.1 -1.3 N.D. +0.4
stress nitrate 200 mM N.D. +0.2 -0.7 N.D. -0.5
nitrogen source Urea (N) N.D. -0.6 +0.5 N.D. -0.7
motility outer cut, LB soft agar motility assay N.D. +0.2 +0.3 N.D. -1.1
carbon source acetate (C) N.D. -0.1 -0.8 N.D. +0.6
carbon source acetate (C) N.D. -0.2 -0.8 N.D. +0.6
stress 1-ethyl-3-methylimidazolium chloride 200 mM N.D. -0.3 +0.4 N.D. +0.8
stress Choline chloride 500 mM N.D. +0.2 +0.2 N.D. +0.9
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