Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_04430 and AO356_04435 are separated by 164 nucleotidesAO356_04435 and AO356_04440 are separated by 521 nucleotidesAO356_04440 and AO356_04445 are separated by 3 nucleotidesAO356_04445 and AO356_04450 are separated by 103 nucleotides AO356_04430: AO356_04430 - hypothetical protein, at 1,002,730 to 1,004,379 _04430 AO356_04435: AO356_04435 - glutamine synthetase, at 1,004,544 to 1,005,926 _04435 AO356_04440: AO356_04440 - LysR family transcriptional regulator, at 1,006,448 to 1,007,380 _04440 AO356_04445: AO356_04445 - 5-carboxymethyl-2-hydroxymuconate isomerase, at 1,007,384 to 1,007,749 _04445 AO356_04450: AO356_04450 - LysR family transcriptional regulator, at 1,007,853 to 1,008,776 _04450
Group Condition AO356_04430 AO356_04435 AO356_04440 AO356_04445 AO356_04450
stress Aluminum chloride 5 mM -6.0 -0.3 -0.1 -0.4 -0.4
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.1 -0.1 +0.3 -1.9 -0.0
stress perchlorate 75 mM +0.0 -0.3 -0.0 -0.5 -0.5
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.4 -0.0 +0.2 -1.0 -0.8
motility outer cut, LB soft agar motility assay -0.1 -0.1 +0.1 -0.8 -0.1
carbon source acetate (C) -0.0 -0.2 -0.1 -0.9 +0.2
carbon source Carbon source D-Glucose 10 mM +0.1 -0.0 +0.0 -0.6 -0.5
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.1 -0.1 +0.1 -1.5 +0.5
carbon source L-Alanine (C) +0.0 +0.0 -0.0 -1.1 +0.2
carbon source succinate (C) +0.1 +0.0 -0.0 -0.6 -0.4
carbon source D-Trehalose (C) +0.0 -0.0 +0.1 -1.3 +0.5
stress KB-half, Pseudo5 supernatant +0.2 -0.1 +0.1 -1.1 +0.2
carbon source Carbon source Sucrose 10 mM -0.0 +0.1 +0.1 -0.4 -0.4
carbon source D-Xylose (C) +0.1 +0.1 +0.1 -1.0 +0.1
nitrogen source Inosine (N) +0.1 -0.0 +0.2 -0.3 -0.4
anaerobic Nitrate reduction with yeast extract +0.0 +0.4 -0.0 -0.5 -0.3
carbon source D,L-Lactate (C) +0.1 +0.1 +0.2 -0.7 +0.1
carbon source D-Trehalose (C) -0.1 +0.1 +0.2 -0.8 +0.3
stress Cisplatin 0.0032 mg/ml +0.2 -0.1 +0.3 -0.8 +0.1
carbon source L-Lysine (C) +0.1 -0.0 -0.2 +0.5 -0.4
survival 4C survival; 360 hrs +0.1 +0.1 +0.1 +0.4 -0.5
carbon source L-Glutamic (C) -0.1 -0.2 +0.1 +0.7 -0.2
stress Paraquat dichloride 0.0625 mg/ml +0.2 -0.2 +0.0 +0.7 -0.1
stress nitrate 200 mM -0.1 +0.2 -0.2 +0.9 -0.1
stress Chlorite 0.04 mM -0.3 -0.0 +0.2 +1.0 +0.1
nitrogen source D-Serine (N) +0.2 +0.0 +0.2 +0.7 +0.1
motility outer cut, LB soft agar motility assay -0.2 -0.1 +0.4 +0.9 +0.4
stress Chlorite 0.08 mM +0.0 -0.1 -0.1 +1.5 +0.3
stress Sisomicin 0.001 mg/ml -0.2 +0.0 -0.2 +1.7 +0.4
motility outer cut, LB soft agar motility assay +0.3 -0.1 -0.1 +1.5 +0.3
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