Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_04325 and AO356_04330 overlap by 4 nucleotidesAO356_04330 and AO356_04335 overlap by 4 nucleotidesAO356_04335 and AO356_04340 are separated by 64 nucleotidesAO356_04340 and AO356_04345 are separated by 318 nucleotides AO356_04325: AO356_04325 - allophanate hydrolase, at 985,215 to 986,135 _04325 AO356_04330: AO356_04330 - allophanate hydrolase, at 986,132 to 986,836 _04330 AO356_04335: AO356_04335 - hypothetical protein, at 986,833 to 987,585 _04335 AO356_04340: AO356_04340 - MFS transporter, at 987,650 to 988,936 _04340 AO356_04345: AO356_04345 - hypothetical protein, at 989,255 to 989,797 _04345
Group Condition AO356_04325 AO356_04330 AO356_04335 AO356_04340 AO356_04345
carbon source L-Histidine (C) -2.2 -3.3 -4.8 -0.3 -0.4
carbon source L-Histidine (C) -2.1 -3.9 -4.6 -0.2 +0.0
carbon source L-Lysine (C) -1.4 -2.6 -1.6 -0.1 -0.1
pH Minimal media pH9 -1.8 -2.2 -1.8 +0.1 +0.0
carbon source D-Lactate (C) -1.6 -2.0 -2.1 -0.0 +0.2
stress Sisomicin 0.001 mg/ml -2.4 -1.2 -1.9 +0.1 +0.4
carbon source L-Lysine (C) -1.8 -1.7 -1.5 -0.2 +0.1
survival 4C survival; 1152 hrs -1.3 -1.4 -1.2 -0.0 -0.7
motility outer cut, LB soft agar motility assay -0.0 -0.7 -0.1 +0.0 -3.7
carbon source D-Lactate (C) -1.7 -1.3 -1.4 -0.2 +0.3
carbon source L-Proline (C) -1.0 -1.2 -1.1 -0.2 -0.3
anaerobic Nitrate reduction with yeast extract -0.2 -0.3 +0.2 -0.1 -3.2
carbon source m-Inositol (C) -1.4 -1.4 -0.6 -0.0 -0.1
carbon source L-Arginine (C) -1.2 -1.3 -1.1 -0.1 +0.2
motility outer cut, LB soft agar motility assay -0.5 -0.5 -0.8 -0.2 -1.2
motility outer cut, LB soft agar motility assay -0.1 -0.2 -0.2 +0.1 -2.9
carbon source L-Arginine (C) -0.9 -1.0 -1.1 -0.0 -0.1
carbon source L-Proline (C) -0.9 -1.1 -1.0 -0.1 +0.2
carbon source m-Inositol (C) -0.8 -1.2 -0.7 -0.1 -0.1
survival 4C survival; 192 hrs -0.7 -1.1 -0.9 -0.0 -0.1
nitrogen source L-tyrosine (N) -1.0 -0.9 -0.8 +0.1 -0.1
survival 4C survival; 672 hrs -0.6 -0.9 -0.8 -0.1 -0.4
carbon source L-Glutamine (C) -0.6 -0.6 -0.9 -0.3 -0.2
motility outer cut, LB soft agar motility assay -0.9 -0.6 -0.4 +0.3 -1.0
survival 4C survival; 360 hrs -1.0 -1.0 -0.7 +0.2 +0.0
carbon source D-Fructose (C) -1.1 -0.9 -0.7 -0.1 +0.3
carbon source acetate (C) -1.1 -1.0 -0.5 -0.0 +0.2
carbon source L-Aspartic Acid (C) -0.7 -1.0 -0.7 -0.1 +0.2
carbon source D-Fructose (C) -0.9 -0.6 -0.7 -0.2 +0.3
stress Cholin acetate 40 mM -1.3 +0.2 -0.5 +0.1 -0.7
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