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Gene
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Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2C3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
AO356_04170 and AO356_04175 are separated by 501 nucleotides
AO356_04175 and AO356_04180 are separated by 256 nucleotides
AO356_04180 and AO356_04185 are separated by 68 nucleotides
AO356_04185 and AO356_04190 are separated by 936 nucleotides
AO356_04170: AO356_04170 - hypothetical protein, at 936,181 to 936,360
_04170
AO356_04175: AO356_04175 - hypothetical protein, at 936,862 to 937,338
_04175
AO356_04180: AO356_04180 - hypothetical protein, at 937,595 to 938,128
_04180
AO356_04185: AO356_04185 - transposase, at 938,197 to 938,898
_04185
AO356_04190: AO356_04190 - hypothetical protein, at 939,835 to 940,104
_04190
Group
Condition
AO356
_04170
AO356
_04175
AO356
_04180
AO356
_04185
AO356
_04190
motility
outer cut, LB soft agar motility assay
N.D.
-0.3
-1.9
-0.1
N.D.
anaerobic
Nitrate reduction with yeast extract
N.D.
-0.5
-1.9
+0.2
N.D.
carbon source
D-Glucose (C)
N.D.
+0.1
-2.0
-0.2
N.D.
carbon source
L-Leucine (C)
N.D.
-0.3
-1.4
+0.1
N.D.
resistance
50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine
N.D.
-0.1
-1.1
-0.2
N.D.
carbon source
L-Lysine (C)
N.D.
+0.1
-1.6
-0.0
N.D.
stress
Spectinomycin 0.025 mg/ml
N.D.
-0.4
-0.6
-0.5
N.D.
nitrogen source
L-Phenylalanine (N)
N.D.
-0.1
-0.9
-0.1
N.D.
carbon source
D-Trehalose (C)
N.D.
-0.1
-0.9
-0.2
N.D.
stress
Spectinomycin 0.0125 mg/ml
N.D.
-0.2
-0.8
-0.1
N.D.
nitrogen source
Gly-Glu (N)
N.D.
+0.1
-1.1
-0.1
N.D.
stress
Nickel (II) chloride 0.625 mM
N.D.
+0.2
-1.1
-0.2
N.D.
carbon source
D-Fructose (C)
N.D.
-0.4
-0.5
-0.2
N.D.
carbon source
D-Ribose (C)
N.D.
-0.1
-0.8
-0.1
N.D.
stress
Nalidixic 0.004 mg/ml
N.D.
-0.2
-0.5
-0.4
N.D.
carbon source
D-Xylose (C)
N.D.
+0.1
-0.8
-0.2
N.D.
stress
Cobalt chloride 0.08 mM
N.D.
+0.1
-0.8
-0.2
N.D.
carbon source
L-Malic (C)
N.D.
+0.2
-0.7
-0.1
N.D.
stress
1-ethyl-3-methylimidazolium chloride 200 mM
N.D.
+0.5
-1.0
-0.0
N.D.
stress
Aluminum chloride 5 mM
N.D.
+0.3
-0.7
-0.1
N.D.
carbon source
Fumarate (C)
N.D.
+0.4
-0.3
-0.4
N.D.
stress
copper (II) chloride 2.5 mM
N.D.
+0.1
+0.6
-0.4
N.D.
stress
Vanillin 1.25 mM
N.D.
-0.2
+0.9
+0.1
N.D.
stress
Thallium(I) acetate 0.008 mg/ml
N.D.
+0.2
+0.8
-0.1
N.D.
stress
Paraquat dichloride 0.0625 mg/ml
N.D.
+0.1
+0.8
+0.0
N.D.
stress
1-ethyl-3-methylimidazolium acetate 20 mM
N.D.
+0.0
+0.9
+0.3
N.D.
stress
Chlorite 0.08 mM
N.D.
+0.3
+0.8
+0.1
N.D.
stress
Cholin acetate 40 mM
N.D.
+0.5
+0.5
+0.2
N.D.
stress
acetate 40 mM
N.D.
+0.5
+0.6
+0.4
N.D.
motility
outer cut, LB soft agar motility assay
N.D.
+0.0
+1.6
-0.1
N.D.
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