Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_03985 and AO356_03990 are separated by 195 nucleotidesAO356_03990 and AO356_03995 are separated by 119 nucleotidesAO356_03995 and AO356_04000 overlap by 44 nucleotidesAO356_04000 and AO356_04005 are separated by 172 nucleotides AO356_03985: AO356_03985 - L-phenylalanine transaminase (EC 2.6.1.57) (from data), at 887,309 to 888,502 _03985 AO356_03990: AO356_03990 - nitroreductase, at 888,698 to 889,261 _03990 AO356_03995: AO356_03995 - potassium transporter TrkH, at 889,381 to 890,835 _03995 AO356_04000: AO356_04000 - AraC family transcriptional regulator, at 890,792 to 891,820 _04000 AO356_04005: AO356_04005 - hypothetical protein, at 891,993 to 892,304 _04005
Group Condition AO356_03985 AO356_03990 AO356_03995 AO356_04000 AO356_04005
stress Sisomicin 0.001 mg/ml -0.0 -0.6 -3.0 -0.3 +0.0
carbon source acetate (C) -0.2 -0.1 -2.2 +0.1 -0.5
nitrogen source L-tyrosine (N) -2.8 +0.2 -0.3 -0.1 +0.2
carbon source acetate (C) -0.2 -0.3 -1.9 +0.0 -0.1
nitrogen source L-Phenylalanine (N) -2.1 -0.1 -0.1 +0.0 +0.1
stress Cobalt chloride 0.08 mM -0.0 +0.0 -1.3 -0.3 -0.2
stress Cisplatin 0.0032 mg/ml -0.1 +0.0 -1.1 -0.1 -0.3
stress Cobalt chloride 0.08 mM +0.1 -0.2 -1.0 -0.4 -0.2
stress Nickel (II) chloride 0.625 mM +0.0 -0.1 -1.0 -0.1 -0.3
stress nitrite 10 mM -0.1 -0.4 -0.9 -0.2 +0.1
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.5 +0.2 -0.5 -0.3 -0.3
carbon source L-Histidine (C) +0.3 -0.2 -0.9 -0.2 -0.1
motility outer cut, LB soft agar motility assay +0.1 +0.6 -1.2 -0.3 -0.2
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.1 -0.6 -1.0 +0.1 +0.4
carbon source L-Histidine (C) +0.4 -0.0 -0.9 -0.0 -0.4
survival 4C survival; 192 hrs +0.3 +0.1 -1.2 +0.1 -0.1
carbon source D-Lactate (C) -0.3 +0.3 -0.9 -0.2 +0.1
motility outer cut, LB soft agar motility assay -0.0 -0.1 -1.4 +0.2 +0.4
stress 1-ethyl-3-methylimidazolium acetate 10 mM +0.1 +0.1 -1.1 -0.0 +0.2
carbon source Inosine (C) -0.0 +0.2 -0.8 -0.4 +0.2
survival 4C survival; 1152 hrs -0.4 -0.1 -0.6 +0.4 -0.0
anaerobic Nitrate reduction with yeast extract +0.3 +0.6 -0.8 -0.5 +0.2
motility outer cut, LB soft agar motility assay +0.5 +0.5 -1.0 +0.1 -0.1
stress Cholin acetate 40 mM +0.1 +0.2 -0.8 -0.0 +0.5
stress Cephalothin 2 mg/ml -0.2 -0.1 -0.5 +0.2 +0.5
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine -0.1 +0.7 -0.4 -0.2 +0.2
motility outer cut, LB soft agar motility assay +0.5 +0.6 -1.1 +0.3 +0.6
stress KB-half, Pseudo5 supernatant +0.1 +0.2 +0.0 +0.7 +0.8
stress methylglyoxal 0.016 vol% -0.0 +0.1 +1.7 +0.0 +0.2
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.1 +0.2 +0.2 +0.7 +1.1
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