Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_03925 and AO356_03930 are separated by 49 nucleotidesAO356_03930 and AO356_03935 are separated by 247 nucleotidesAO356_03935 and AO356_03940 overlap by 4 nucleotidesAO356_03940 and AO356_03945 are separated by 4 nucleotides AO356_03925: AO356_03925 - flagellar basal-body rod protein FlgG, at 873,722 to 874,507 _03925 AO356_03930: AO356_03930 - flagellar biosynthesis protein FlgF, at 874,557 to 875,294 _03930 AO356_03935: AO356_03935 - glycosyl transferase family 2, at 875,542 to 879,048 _03935 AO356_03940: AO356_03940 - methyltransferase type 12, at 879,045 to 879,797 _03940 AO356_03945: AO356_03945 - phytanoyl-CoA dioxygenase, at 879,802 to 880,581 _03945
Group Condition AO356_03925 AO356_03930 AO356_03935 AO356_03940 AO356_03945
motility outer cut, LB soft agar motility assay -2.1 -4.4 +0.0 -0.2 +0.1
motility outer cut, LB soft agar motility assay -2.8 -3.3 +0.1 -0.5 +0.1
motility outer cut, LB soft agar motility assay -2.3 -3.5 -0.2 -0.3 +0.2
motility outer cut, LB soft agar motility assay -1.6 -3.2 +0.0 -0.4 +0.2
survival 4C survival; 1152 hrs -1.4 -2.1 -0.0 -0.5 +0.2
survival 4C survival; 360 hrs -1.3 -1.4 +0.1 -0.1 +0.1
anaerobic Nitrate reduction with yeast extract -2.6 -0.6 +0.5 -0.0 +0.5
survival 4C survival; 672 hrs -1.4 -0.6 -0.0 -0.2 -0.1
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.5 +1.2 -0.2 -0.3 -0.4
pH Minimal media pH8 +0.6 +1.1 -0.1 -0.1 -0.0
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.8 +0.9 -0.1 -0.1 +0.1
pH Minimal media pH6 +1.0 +0.8 -0.0 -0.1 -0.1
carbon source m-Inositol (C) +0.8 +1.0 +0.1 -0.1 +0.0
stress KB-half, Pseudo5 supernatant +0.6 +1.3 -0.0 -0.0 -0.0
carbon source Fumarate (C) +0.9 +0.7 +0.1 +0.1 +0.2
carbon source D-Galactose (C) +0.9 +0.8 +0.1 +0.2 -0.0
carbon source D-Fructose (C) +0.8 +1.0 +0.1 +0.1 +0.1
carbon source D-Ribose (C) +1.1 +1.0 +0.0 +0.1 +0.0
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +1.1 +1.2 -0.0 +0.1 +0.1
resistance 10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.9 +1.6 -0.0 -0.2 +0.1
carbon source Cytidine (C) +1.3 +0.9 -0.0 +0.3 -0.0
carbon source Uridine (C) +1.4 +1.3 -0.1 +0.1 -0.0
carbon source acetate (C) +1.2 +1.4 +0.0 +0.1 -0.0
carbon source D-Ribose (C) +1.3 +1.3 +0.0 +0.2 -0.0
carbon source acetate (C) +1.3 +1.4 +0.1 +0.1 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) +1.9 +1.8 -0.0 -0.2 -0.2
carbon source D-Xylose (C) +1.8 +1.7 +0.0 +0.1 -0.1
carbon source D-Trehalose (C) +2.2 +2.2 -0.0 -0.0 -0.1
carbon source D-Xylose (C) +2.1 +2.2 +0.2 -0.0 +0.1
carbon source D-Trehalose (C) +2.2 +2.4 +0.0 +0.0 -0.1
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