Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_03875 and AO356_03880 are separated by 72 nucleotidesAO356_03880 and AO356_03885 are separated by 274 nucleotidesAO356_03885 and AO356_03890 are separated by 330 nucleotidesAO356_03890 and AO356_03895 are separated by 64 nucleotides AO356_03875: AO356_03875 - flagellar biosynthesis protein FlaG, at 857,400 to 857,765 _03875 AO356_03880: AO356_03880 - flagellin, at 857,838 to 858,686 _03880 AO356_03885: AO356_03885 - beta-ketoacyl-ACP synthase, at 858,961 to 859,887 _03885 AO356_03890: AO356_03890 - glycosyl transferase family 2, at 860,218 to 863,112 _03890 AO356_03895: AO356_03895 - glycosyl transferase family 2, at 863,177 to 866,758 _03895
Group Condition AO356_03875 AO356_03880 AO356_03885 AO356_03890 AO356_03895
motility outer cut, LB soft agar motility assay +0.5 -3.1 -0.2 +0.4 +0.1
stress KB-half, Pseudo5 supernatant -0.5 -0.3 -0.7 -0.2 -0.2
stress copper (II) chloride 2.5 mM +0.0 +0.5 -1.6 -0.2 +0.0
survival 4C survival; 360 hrs +0.0 -1.3 -0.4 +0.3 +0.2
motility outer cut, LB soft agar motility assay +1.0 -1.9 -0.2 +0.2 -0.2
survival 4C survival; 672 hrs +0.1 -1.7 -0.1 +0.5 +0.2
stress Sisomicin 0.001 mg/ml -0.4 -1.0 +0.2 +0.0 +0.2
motility outer cut, LB soft agar motility assay +2.2 -3.9 -0.3 +0.7 +0.4
carbon source L-Lysine (C) +0.0 +0.3 -1.2 +0.1 +0.2
survival 4C survival; 1152 hrs +0.2 -2.1 +0.1 +0.7 +0.6
carbon source L-Lysine (C) +0.3 +0.3 -1.0 +0.1 +0.1
motility outer cut, LB soft agar motility assay +1.9 -2.6 -0.4 +0.7 +0.3
stress Rifampicin 0.0024 mg/ml -0.3 -0.3 +1.6 -0.1 -0.1
carbon source D-Xylose (C) +0.2 +1.3 -0.8 +0.0 +0.1
carbon source Uridine (C) +0.1 +1.0 -0.4 +0.0 +0.2
carbon source Cytidine (C) +0.0 +1.0 -0.4 +0.0 +0.2
anaerobic Nitrate reduction with yeast extract +1.0 -0.3 -0.0 +0.4 +0.1
carbon source D-Xylose (C) +0.1 +1.6 -0.7 +0.1 +0.2
stress Spectinomycin 0.025 mg/ml -0.2 +0.5 +0.6 +0.2 +0.2
carbon source D-Trehalose (C) -0.0 +2.1 -0.9 +0.1 +0.2
resistance 50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine +0.2 +1.0 +0.6 -0.1 -0.1
stress Cobalt chloride 0.08 mM -0.0 +0.6 +1.2 +0.1 -0.1
stress Cobalt chloride 0.08 mM +0.1 +0.4 +1.2 -0.0 -0.0
carbon source D-Trehalose (C) -0.1 +2.2 -0.7 +0.1 +0.3
pH Minimal media pH6 +0.2 +1.1 +0.1 +0.2 +0.5
pH Minimal media pH6 -0.2 +1.3 +0.1 +0.2 +0.6
stress perchlorate 75 mM +0.2 +0.5 +1.5 -0.1 +0.1
nitrogen source D-Glucosamine Hydrochloride (N) +0.7 +1.4 -0.2 +0.0 +0.3
stress Benzalkonium Chloride 0.016 mg/ml -0.1 +0.2 +3.4 -0.1 -0.2
stress methylglyoxal 0.016 vol% +0.3 +0.2 +2.8 +0.0 +0.0
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