Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_03440 and AO356_03445 are separated by 231 nucleotidesAO356_03445 and AO356_03450 are separated by 120 nucleotidesAO356_03450 and AO356_03455 overlap by 4 nucleotidesAO356_03455 and AO356_03460 are separated by 28 nucleotides AO356_03440: AO356_03440 - hypothetical protein, at 764,708 to 764,986 _03440 AO356_03445: AO356_03445 - 30S ribosomal protein S1, at 765,218 to 766,912 _03445 AO356_03450: AO356_03450 - cytidylate kinase, at 767,033 to 767,722 _03450 AO356_03455: AO356_03455 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 767,719 to 769,926 _03455 AO356_03460: AO356_03460 - aspartate aminotransferase, at 769,955 to 771,067 _03460
Group Condition AO356_03440 AO356_03445 AO356_03450 AO356_03455 AO356_03460
carbon source Carbon source D-Glucose 10 mM -0.3 N.D. N.D. -2.2 -0.3
motility outer cut, LB soft agar motility assay -0.3 N.D. N.D. -0.8 -1.0
motility outer cut, LB soft agar motility assay -0.4 N.D. N.D. -1.4 -0.3
carbon source Carbon source D-Mannitol 5 mM -0.4 N.D. N.D. -1.2 -0.1
stress Choline chloride 300 mM -0.3 N.D. N.D. -1.1 -0.1
stress Sisomicin 0.001 mg/ml -0.6 N.D. N.D. -0.5 -0.4
carbon source Carbon source Sucrose 2.5 mM -0.3 N.D. N.D. -1.1 -0.1
carbon source D-Lactate (C) -0.6 N.D. N.D. -0.4 -0.5
survival 4C survival; 1152 hrs -0.2 N.D. N.D. -1.1 -0.1
carbon source D-Xylose (C) +0.1 N.D. N.D. -1.2 -0.3
carbon source Carbon source D-Mannitol 10 mM -0.2 N.D. N.D. -1.1 +0.0
carbon source D-Xylose (C) -0.1 N.D. N.D. -0.7 -0.4
carbon source Carbon source Sucrose 10 mM -0.1 N.D. N.D. -1.2 +0.0
nitrogen source Adenine (N) -0.4 N.D. N.D. -0.7 -0.1
carbon source Carbon source D-Mannitol 5 mM +0.1 N.D. N.D. -0.8 -0.5
carbon source Carbon source Sucrose 2.5 mM +0.1 N.D. N.D. -1.1 -0.3
carbon source L-Alanine (C) -0.3 N.D. N.D. -1.0 +0.0
carbon source D-Fructose (C) +0.0 N.D. N.D. -1.0 -0.2
stress Nickel (II) chloride 0.625 mM -0.1 N.D. N.D. -1.0 +0.1
pH Minimal media pH9 +0.2 N.D. N.D. -1.1 +0.0
carbon source NAG (C) -0.6 N.D. N.D. -0.6 +0.3
carbon source Inosine (C) -0.4 N.D. N.D. -0.6 +0.3
carbon source D-Alanine (C) -0.1 N.D. N.D. -0.6 +0.6
carbon source L-Lysine (C) +0.4 N.D. N.D. +0.7 -0.3
carbon source L-Lysine (C) +0.3 N.D. N.D. +0.9 -0.4
phage P5ss-5 phage 10-1 dilution SM calcl2 +0.8 N.D. N.D. +0.3 -0.3
stress Chlorite 0.04 mM +0.3 N.D. N.D. +1.0 -0.0
stress nitrate 200 mM +0.6 N.D. N.D. +0.5 +0.1
stress KB-half, Pseudo5 supernatant +0.5 N.D. N.D. +1.2 +0.1
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.5 N.D. N.D. +1.2 +0.2
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