Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_03360 and AO356_03365 are separated by 25 nucleotidesAO356_03365 and AO356_03370 are separated by 7 nucleotidesAO356_03370 and AO356_03375 are separated by 24 nucleotidesAO356_03375 and AO356_03380 are separated by 80 nucleotides AO356_03360: AO356_03360 - hypothetical protein, at 747,643 to 748,884 _03360 AO356_03365: AO356_03365 - UDP-N-acetylglucosamine 2-epimerase, at 748,910 to 749,974 _03365 AO356_03370: AO356_03370 - glycosyl transferase, at 749,982 to 751,088 _03370 AO356_03375: AO356_03375 - ExsB family protein, at 751,113 to 752,267 _03375 AO356_03380: AO356_03380 - glycosyl amidation-associated protein WbuZ, at 752,348 to 753,109 _03380
Group Condition AO356_03360 AO356_03365 AO356_03370 AO356_03375 AO356_03380
nitrogen source D-Glucosamine Hydrochloride (N) -5.4 -4.9 N.D. -4.2 -4.5
nitrogen source L-Phenylalanine (N) -2.0 -2.8 N.D. -3.9 -4.6
survival 4C survival; 192 hrs -3.0 -3.9 N.D. -3.4 -1.3
carbon source NAG (C) -3.6 -3.8 N.D. -2.0 -1.3
motility outer cut, LB soft agar motility assay -3.1 -2.6 N.D. -3.9 -1.0
carbon source D-Trehalose (C) -3.8 -4.1 N.D. -1.6 -1.0
stress perchlorate 75 mM -2.5 -1.7 N.D. -3.8 -2.4
stress Cobalt chloride 0.08 mM -3.2 -2.9 N.D. -1.3 -2.6
pH Minimal media pH9 -1.9 -3.3 N.D. -3.0 -1.5
nitrogen source Adenine (N) -2.7 -3.0 N.D. -1.8 -2.2
nitrogen source L-Leucine (N) -2.2 -2.0 N.D. -2.9 -2.4
nitrogen source Gly-Glu (N) -2.4 -1.9 N.D. -2.7 -2.4
stress acetate 40 mM -4.3 -2.8 N.D. -1.2 -0.9
carbon source D-Trehalose (C) -3.5 -2.4 N.D. -2.0 -1.0
stress Cobalt chloride 0.08 mM -2.6 -2.6 N.D. -0.9 -2.7
stress Choline chloride 500 mM -2.1 -2.0 N.D. -3.3 -1.2
nitrogen source Urea (N) -2.1 -2.0 N.D. -2.3 -2.1
nitrogen source Inosine (N) -3.3 -1.7 N.D. -2.8 -0.4
survival 4C survival; 360 hrs -2.6 -2.1 N.D. -3.2 -0.3
motility outer cut, LB soft agar motility assay -3.6 -1.7 N.D. -1.1 -1.7
nitrogen source Thymine (N) -2.1 -1.3 N.D. -0.8 -3.8
stress Choline chloride 300 mM -2.0 -2.1 N.D. -1.9 -1.7
carbon source L-Lysine (C) -2.1 -1.2 N.D. -3.1 -1.3
stress nitrate 200 mM -2.1 -1.8 N.D. -2.8 -0.9
survival 4C survival; 1152 hrs -1.5 -2.7 N.D. -2.2 -1.0
stress Benzethonium chloride 0.025 mM -1.7 -2.6 N.D. -0.8 -2.1
anaerobic Nitrate reduction with yeast extract +1.4 -0.8 N.D. -4.0 -1.6
stress Doxycycline hyclate 0.0001 mg/ml +2.4 +2.0 N.D. +3.0 +2.8
stress Lomefloxacin 0.0005 mM +2.3 +2.7 N.D. +3.3 +2.6
phage P5ss-5 phage 10-1 dilution SM calcl2 +7.1 +7.7 N.D. +5.8 +0.7
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