Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_03325 and AO356_03330 are separated by 15 nucleotidesAO356_03330 and AO356_03335 are separated by 169 nucleotidesAO356_03335 and AO356_03340 are separated by 451 nucleotidesAO356_03340 and AO356_03345 are separated by 55 nucleotides AO356_03325: AO356_03325 - hypothetical protein, at 740,107 to 740,958 _03325 AO356_03330: AO356_03330 - GntR family transcriptional regulator, at 740,974 to 741,627 _03330 AO356_03335: AO356_03335 - competence protein ComEA, at 741,797 to 742,132 _03335 AO356_03340: AO356_03340 - hypothetical protein, at 742,584 to 743,486 _03340 AO356_03345: AO356_03345 - hypothetical protein, at 743,542 to 745,536 _03345
Group Condition AO356_03325 AO356_03330 AO356_03335 AO356_03340 AO356_03345
nitrogen source D-Glucosamine Hydrochloride (N) -0.0 -0.1 +0.0 +0.1 -4.1
carbon source D-Trehalose (C) -0.1 -0.0 -0.3 -0.2 -3.1
carbon source NAG (C) -0.1 +0.2 -0.0 +0.0 -3.7
stress Benzalkonium Chloride 0.016 mg/ml -0.2 +0.1 -0.1 +0.1 -3.1
stress Cobalt chloride 0.08 mM -0.1 -0.2 -0.1 +0.2 -2.8
stress 1-ethyl-3-methylimidazolium lysine 10 mM -0.1 -0.0 -0.3 -0.1 -2.5
stress Benzethonium chloride 0.025 mM +0.1 -0.0 +0.2 -0.1 -3.1
nitrogen source Adenine (N) +0.1 -0.2 +0.0 +0.1 -3.0
pH Minimal media pH9 -0.2 -0.3 +0.0 -0.4 -2.0
nitrogen source Gly-Glu (N) -0.0 -0.1 +0.0 -0.0 -2.6
stress Rifampicin 0.0024 mg/ml +0.0 +0.1 -0.0 -0.0 -2.7
carbon source Inosine (C) -0.1 -0.1 -0.4 -0.0 -2.0
carbon source D-Trehalose (C) +0.1 +0.1 -0.0 +0.0 -2.7
carbon source L-Lysine (C) +0.0 -0.2 -0.3 -0.3 -1.8
nitrogen source L-Leucine (N) -0.0 +0.0 +0.0 +0.0 -2.5
nitrogen source L-Phenylalanine (N) +0.0 +0.1 -0.0 +0.1 -2.6
stress nitrite 10 mM -0.0 -0.3 -0.1 +0.1 -2.1
stress Bacitracin 2 mg/ml -0.1 -0.1 -0.1 -0.1 -2.1
stress Benzalkonium Chloride 0.008 mg/ml -0.2 +0.0 +0.1 -0.3 -2.0
survival 4C survival; 192 hrs +0.2 +0.1 -0.0 +0.0 -2.6
survival 4C survival; 360 hrs +0.2 -0.2 -0.3 -0.3 -1.7
nitrogen source Urea (N) +0.1 -0.1 -0.0 -0.1 -2.1
nitrogen source Inosine (N) +0.1 +0.1 +0.2 +0.1 -2.5
stress Cobalt chloride 0.08 mM -0.0 -0.0 +0.3 +0.3 -2.4
carbon source L-Lysine (C) -0.2 -0.1 +0.4 +0.2 -2.2
stress Rifampicin 0.0016 mg/ml +0.1 +0.1 -0.1 +0.1 -2.0
motility outer cut, LB soft agar motility assay -0.2 +0.2 +0.5 +0.1 -2.0
stress Paraquat dichloride 0.0625 mg/ml -0.0 -0.1 +0.3 +0.2 -1.7
anaerobic Nitrate reduction with yeast extract +0.3 -0.1 +0.9 -0.4 -1.3
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.1 +0.1 -0.6 -0.4 +6.6
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