Fitness for 5 genes in Pseudomonas fluorescens FW300-N2C3

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500 ntAO356_03025 and AO356_03030 are separated by 2 nucleotidesAO356_03030 and AO356_03035 overlap by 4 nucleotidesAO356_03035 and AO356_03040 are separated by 126 nucleotidesAO356_03040 and AO356_03045 are separated by 492 nucleotides AO356_03025: AO356_03025 - hypothetical protein, at 674,701 to 675,015 _03025 AO356_03030: AO356_03030 - hypothetical protein, at 675,018 to 675,407 _03030 AO356_03035: AO356_03035 - hypothetical protein, at 675,404 to 675,739 _03035 AO356_03040: AO356_03040 - deoxyguanosinetriphosphate triphosphohydrolase, at 675,866 to 677,194 _03040 AO356_03045: AO356_03045 - LuxR family transcriptional regulator, at 677,687 to 678,313 _03045
Group Condition AO356_03025 AO356_03030 AO356_03035 AO356_03040 AO356_03045
carbon source Carbon source Sucrose 10 mM -0.2 -0.3 N.D. -0.2 -0.1
stress Benzalkonium Chloride 0.016 mg/ml -0.3 -0.5 N.D. +0.1 -0.2
nitrogen source Carnitine Hydrochloride (N) -0.4 -0.2 N.D. -0.2 +0.1
nitrogen source Gly-Glu (N) -0.2 -0.3 N.D. -0.1 +0.3
carbon source L-Histidine (C) -0.8 +0.4 N.D. +0.0 +0.1
anaerobic Nitrate reduction with yeast extract +0.3 -0.8 N.D. -0.2 +0.4
carbon source L-Lysine (C) -0.3 -0.2 N.D. +0.2 +0.2
carbon source Fumarate (C) -0.4 +0.1 N.D. +0.2 +0.3
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 -0.2 N.D. +0.1 +0.5
stress copper (II) chloride 2.5 mM +0.1 -0.3 N.D. +0.0 +0.5
stress Thallium(I) acetate 0.008 mg/ml -0.4 +0.2 N.D. +0.2 +0.3
carbon source L-Histidine (C) -0.3 +0.3 N.D. +0.1 +0.2
phage P5ss-5 phage 10-1 dilution SM calcl2 -0.0 +0.5 N.D. +0.2 -0.2
stress Cobalt chloride 0.08 mM -0.1 -0.2 N.D. +0.1 +0.6
stress 1-ethyl-3-methylimidazolium chloride 200 mM -0.2 +0.5 N.D. -0.0 +0.3
stress sodium fluoride 6.25 mM -0.1 +0.2 N.D. +0.2 +0.4
stress Cobalt chloride 0.08 mM -0.0 -0.2 N.D. +0.1 +0.7
stress Nickel (II) chloride 0.625 mM +0.1 -0.2 N.D. +0.1 +0.6
pH Minimal media pH9 +0.2 +0.5 N.D. +0.1 -0.1
stress nitrate 200 mM -0.2 +0.6 N.D. +0.2 +0.2
stress Doxycycline hyclate 0.0001 mg/ml +0.3 +0.2 N.D. -0.0 +0.4
carbon source Fumarate (C) -0.2 +0.3 N.D. +0.2 +0.6
motility outer cut, LB soft agar motility assay -0.2 -0.2 N.D. +0.3 +1.0
motility outer cut, LB soft agar motility assay -0.0 +0.3 N.D. -0.1 +0.8
motility outer cut, LB soft agar motility assay -0.1 +0.2 N.D. -0.2 +1.1
stress Sisomicin 0.001 mg/ml +0.5 +0.3 N.D. +0.1 +0.4
stress Nickel (II) chloride 0.625 mM +0.1 +0.2 N.D. +0.2 +0.8
stress KB-half, Pseudo11 supernatant, 100 uM FeCl3 +0.5 +0.6 N.D. +0.0 +0.1
motility outer cut, LB soft agar motility assay +0.1 -0.0 N.D. +0.5 +0.8
stress Ceftazidime 0.2 mg/ml -0.0 -0.1 N.D. +0.2 +3.7
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